Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0821 ATGATGATTTCCTTAGCGAAGAAGCTCTTGCAGAGACGACCGCCGCCGCTTCGCTGGCGAAGCTACTTTTCTCAGGCGTCGGCAGACACCAAAAACGATGCCGTCGCCGCCCTGGAGCTTCCGTCGTTCGATTACTCCCCGCCGCCGTATGCGGGACCCACCGCCGGCGAGATTCTGGCGAAGCGCAAGGAGTATCTTAGCCCTTCCCTCTTCCACTTCTACAAGACCCCCGTGAACATAGTGGAGGGTAGGATGCAGTATCTATTCGATGAGAAGGGGAGGAGGTACGTGGATGCGTTTGGAGGGATTGCTACGGTGTGTTGCGGGCACTGTCACCCTGATGTGGTGGAAGCCATAGTTGACCAAAGTAAACGGTTGCAGCACTCCACGGTTCTTTACCTTAACCACGCCATTGCTGATTTCGCTCAGGCTTTGGCCTCCAAGCTTCCCGGTAATCTCAAGGTGGTGTTTTTCACAAACTCTGGAACAGAAGCAAACGAATTGGCGATACTGATAGCAAAGTTGTACACTGGGTGCCATGACATAATATCCTTAAGGAATGCTTATCACGGAAATGCAGCTGGGACGATGGGGGCCACAGCTCAAAGCATCTGGAAATTCAATGTAGTACAGAGTGGTGTTCATCATGCACTAAATCCAGACCCTTATAGAGGCATTTTCGGTTCTGATGGAGAGAAGTATGCAAGAGATGTCCAAGATATCATTAACTTCGGAACTTTTGGAAATGTTGCAGCCTTCATATCTGAAGCAATACAGGGAGTGGGGGGCATTGTTGAATTGGCTCCTGGTTACTTGCCTGCTGTGTACAACACCATTAAAAAAGCCGGAGGACTTTTTATAGCTGATGAGGTTCAGGCTGGCTTTGCTCGCACTGGTAGCCATTTCTGGGGATTTGAGGCCCACGGTGTTGTTCCTGACATTGTGACAATGGCTAAGGGCATTGGAAATGGCGTTCCCCTTGGTGCTGTTGTAACTACTCCAGAGATTGCAGAGGTCCTAACCCGGCGAAGTTACTTCAACACCTTTGGAGGGAATCCTGTTAGTACTGCAGCAGGGTTGGCTGTTTTAAAAGTAATAGAGAAAGAGAAGCTTCAAGAAAATGCATTTGTGGTTGGATCCTATTTGAAAGAGAGGCTCACTACTCTCAAGGACAAATATGAATTAATTGGTGATGTTAGAGGACGAGGCCTGATGCTTGGAGTTGAACTTGTCACTGATAGCGAACTTAAAACACCAGCAAAAGCTGAAACATTGCATGTAATGGACCAAATGAAAGAATTAGGAGTACTTATCGGCAAGGGTGGTTACTACGGAAATGTCTTCAGAATTACACCCCCTTTATGTTTCAGCAAAGAAGATGCAGACTTCCTAGCAGACGCAATGGACCTGACCTTGTCTAGAATGTGA 1428 0.4797 MMISLAKKLLQRRPPPLRWRSYFSQASADTKNDAVAALELPSFDYSPPPYAGPTAGEILAKRKEYLSPSLFHFYKTPVNIVEGRMQYLFDEKGRRYVDAFGGIATVCCGHCHPDVVEAIVDQSKRLQHSTVLYLNHAIADFAQALASKLPGNLKVVFFTNSGTEANELAILIAKLYTGCHDIISLRNAYHGNAAGTMGATAQSIWKFNVVQSGVHHALNPDPYRGIFGSDGEKYARDVQDIINFGTFGNVAAFISEAIQGVGGIVELAPGYLPAVYNTIKKAGGLFIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGVPLGAVVTTPEIAEVLTRRSYFNTFGGNPVSTAAGLAVLKVIEKEKLQENAFVVGSYLKERLTTLKDKYELIGDVRGRGLMLGVELVTDSELKTPAKAETLHVMDQMKELGVLIGKGGYYGNVFRITPPLCFSKEDADFLADAMDLTLSRM* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0821 475 PIRSF Transaminase_4ab_Lys_Orn 71 181 IPR005814 GO:0008483|GO:0030170
Apr10g0821 475 PIRSF Transaminase_4ab_Lys_Orn 177 475 IPR005814 GO:0008483|GO:0030170
Apr10g0821 475 PANTHER - 24 475 - -
Apr10g0821 475 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 286 324 IPR005814 GO:0008483|GO:0030170
Apr10g0821 475 Gene3D Aspartate Aminotransferase, domain 1 77 470 IPR015422 GO:0003824
Apr10g0821 475 PANTHER ALANINE--GLYOXYLATE AMINOTRANSFERASE 2 HOMOLOG 3, MITOCHONDRIAL-LIKE ISOFORM X1 24 475 - -
Apr10g0821 475 SUPERFAMILY PLP-dependent transferases 70 472 IPR015424 -
Apr10g0821 475 CDD OAT_like 62 469 IPR005814 GO:0008483|GO:0030170
Apr10g0821 475 Pfam Aminotransferase class-III 76 469 IPR005814 GO:0008483|GO:0030170
Apr10g0821 475 Gene3D - 112 369 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0821 Apr-Chr10 20374941 20381592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0821 K00827 - gmx:100170733 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0821 10 20374941 20381592 Apr10g0821 10 20374941 20381592 ECH