Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0811 ATGAAGAAGCAAAAGTGCTTAGAGACGCAAAACAAAAACCCGTTCGAGTTTCTAACGGAGGAGTTAATATTCACCATCCTCGACTATCTACAAACGGACCCGTTAGATAAAAAGTCTTTCTCCCTCACGTGTAAGTGGTTCTACGCCGTTGAAGCCAAACACCGTCGATCGTTGAGGCCGTTACGGGCAGAGCACCTGCCAGCTATCGTTGCCCGCTATCCCTCAGTCACCGACCTCGATCTTTCCCTCTGCCCGCGCGTGCCCGATGCCTCCCTCGCCCTCGTCGCCGGCGCGTACCGCAACACGCTCCGCCGACTTGACTTGTCGCGATCGCGGTTCTTCACCGGGAAAGGGTTGCTGAGCGTCGGAGTGAACTGCTGCAACCTGGTAGAGCTTGACCTGTCTAACGCGACGGAGCTGAGGGACGCTGCGGCGGCGGCGGTGGCGCGTGCGAGGAACTTGCAGAAGCTGTGGCTGGCCAGGTGCAAGTTGATTACGGACATGGGGATTGGGTGTATTGCGGTGGGATGTAGGAAATTGAGGTTGATTTGCTTGAAGTGGTGTGTGGGGATTGGATATTTGGGTGTGGATTTGGTTGCAATCAAGTGCAAGGAGCTTCGCTCTTTGGATCTCTCTTATTTGCCTATCACGGAGAAATGTCTGTCGTCAATCTTCAAATTGCAGCATCTTGAAGATTTGGTCATTGAAGGATGCTTTGGCATTGATGACGACAGCCTCGATGTCGAACTCTTCAAACAAGGGTGTAGGACGTTGAAGAAACTTGATATCTCAGGTTGTCAAAACCTAAGTCACATTGGGCTGTCAAAGCTAACAAGCATTTCTGGATGTGTAGAGCAACTTGTTCTATCAGATGGTTCTCCTGTGACTCTTGCACTTGTTGATGGTTTGAATAAACTTTCCATGTTGAAATCAATCATATTGGATGGCTGCACTGTTACTTCTGATGGATTAAGGGCCATTGGAAATTTGTGCATTTCACTCAGGGAGCTTAGTCTGAGCAAATGTTTGGGGGTGACAGATGAAGCTCTCTCTTTCCTTGTGTCAAAACACAAAGATTTAAGGAAGGTTGACATCACATGCTGCCGCAAGATAACTGATGTTTCCATTGCTGGCATTGCAAATTCCTGCACAAGTCTCACTTCGCTCAAAATGGAGTCATGCACACTAGTTCCACCAGAAGCATTTGTCTTGATTGGACAAAAATGCCATTTTCTTGAGGAGCTTGACCTAACAGATAATGAAATTGACGATGAAGGTCTTAAGTCCATCTCTTCTTGTTCACGACTCTCCAGTTTGAAAGTAGGAATCTGCCTGAATATAACTGACAGAGGACTTGCCTATGTTGGCATGCGTTGCTCAAAGTTAAAGGAGCTAGATCTATATAGGTCTACAGGAGTAACAGATTTGGGCATTTCAGCAATTGCTCATGGATGCCCTGGCCTTGAGATGATAAATACATCTTATTGCACTAGTATCACTGACAGGGCACTACTCTCATTGTCGAAATGTTCAACTTTGAAGACCCTTGAAATTCGTGGATGTCTTCTTGTTACATCAATCGGTGTGGCAGCTATTGCAATGAATTGCAAACAGCTAAGCCGTCTAGACATAAAAAAGTGTTATAACATTGATGATAGTGGTATGCTTCCACTAGCTCATTTCTCCCAAAATCTAAGACAGATAAATTTGTCATATAGCTCGGTTACAGATGTGGGGCTGCTTTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACTGTGCTTCATCTGCAGGGCTTGGTTCCTGGAGGACTGGCTGCTGCCTTATTAGCTTGTGGAGGGCTCACAAAAGTGAAGCTCCATCTTTCACTAAGATCTCTGTTACCTGAGCTGCTTATCAGACATGTAGAAGCACGTGGATGTGTGTTTGAATGGAGAGACAAAGAGTTTCAGGCTGAATTGGACCCGAAGTGTTGGAAATTACAGTTGGAAGATCTGATGCAATAG 2007 0.4619 MKKQKCLETQNKNPFEFLTEELIFTILDYLQTDPLDKKSFSLTCKWFYAVEAKHRRSLRPLRAEHLPAIVARYPSVTDLDLSLCPRVPDASLALVAGAYRNTLRRLDLSRSRFFTGKGLLSVGVNCCNLVELDLSNATELRDAAAAAVARARNLQKLWLARCKLITDMGIGCIAVGCRKLRLICLKWCVGIGYLGVDLVAIKCKELRSLDLSYLPITEKCLSSIFKLQHLEDLVIEGCFGIDDDSLDVELFKQGCRTLKKLDISGCQNLSHIGLSKLTSISGCVEQLVLSDGSPVTLALVDGLNKLSMLKSIILDGCTVTSDGLRAIGNLCISLRELSLSKCLGVTDEALSFLVSKHKDLRKVDITCCRKITDVSIAGIANSCTSLTSLKMESCTLVPPEAFVLIGQKCHFLEELDLTDNEIDDEGLKSISSCSRLSSLKVGICLNITDRGLAYVGMRCSKLKELDLYRSTGVTDLGISAIAHGCPGLEMINTSYCTSITDRALLSLSKCSTLKTLEIRGCLLVTSIGVAAIAMNCKQLSRLDIKKCYNIDDSGMLPLAHFSQNLRQINLSYSSVTDVGLLSLASISCLQSFTVLHLQGLVPGGLAAALLACGGLTKVKLHLSLRSLLPELLIRHVEARGCVFEWRDKEFQAELDPKCWKLQLEDLMQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0811 668 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 1 610 - -
Apr10g0811 668 Gene3D Ribonuclease Inhibitor 402 654 IPR032675 -
Apr10g0811 668 Pfam Leucine Rich repeat 509 533 IPR001611 GO:0005515
Apr10g0811 668 Pfam Leucine Rich repeat 408 431 IPR001611 GO:0005515
Apr10g0811 668 Pfam Leucine Rich repeat 562 584 IPR001611 GO:0005515
Apr10g0811 668 Pfam Leucine Rich repeat 255 277 IPR001611 GO:0005515
Apr10g0811 668 Gene3D Ribonuclease Inhibitor 8 198 IPR032675 -
Apr10g0811 668 Gene3D Ribonuclease Inhibitor 199 297 IPR032675 -
Apr10g0811 668 PANTHER UNCHARACTERIZED 1 610 - -
Apr10g0811 668 SUPERFAMILY RNI-like 131 524 - -
Apr10g0811 668 Gene3D Ribonuclease Inhibitor 298 401 IPR032675 -
Apr10g0811 668 SUPERFAMILY F-box domain 8 50 IPR036047 GO:0005515
Apr10g0811 668 SMART LRR_CC_2 203 227 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 485 510 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 383 408 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 459 484 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 562 586 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 513 535 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 151 176 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 177 202 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 100 125 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 306 330 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 434 458 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 331 356 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 73 98 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 357 382 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 536 561 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 255 280 IPR006553 -
Apr10g0811 668 SMART LRR_CC_2 409 433 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0811 Apr-Chr10 20121467 20127228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0811 K10268 - gmx:100803617 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0811 10 20121467 20127228 Apr10g0811 10 20121467 20127228 ECH