Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0809 ATGAGAAAACTAGAGAAAATGGCAGTTTCAAATGATTCAGAAATGAAGATTGATGTGCAACCAGAGCCTAGTGTGGACCCCAACGCCCCGAGAACCGGTGCCCGTGGTTCCGGTGCCAGTGCCGCCGGGGTCCTACAACTGTGGAAGAGGAAAGATATGCTAAAAAGAGGCTCATTGGGGTTTAGAGGAATTGCTCTATTTTTCTCTTTGATTTCCTTCATCCTTGTGGCTAGTAACAACCATGGTGATTGGAAAGAATTTGACAAGTACCAAGAATACAGGTACTTGCTGGCTGTGGCAATTATATCTAGTTTGTACACTGGAGTCCAAGTGTTTCGTCAAGTTCATGAACTTTCCATAGGAAAAAGCCTGCTTCAGCCAAGAATTTCAGGGTTGATTGATTTTGTTGGAGATCAGGTTGTGGCATATCTCTTGATATCATCTGCATCTTCAGCGATTCCAATAACAGATAGAATGAGGGAAACCGTTGACAATATATTTACGGATTCTTCAGCTGCAGCCATTTGCTTCTCCTTCTTTGCCTTTCTGTGTGTAGCACTGTCAGCTGTTATATCAGGACACAACCTTTCTGCTCAAACTTATACATGA 609 0.4302 MRKLEKMAVSNDSEMKIDVQPEPSVDPNAPRTGARGSGASAAGVLQLWKRKDMLKRGSLGFRGIALFFSLISFILVASNNHGDWKEFDKYQEYRYLLAVAIISSLYTGVQVFRQVHELSIGKSLLQPRISGLIDFVGDQVVAYLLISSASSAIPITDRMRETVDNIFTDSSAAAICFSFFAFLCVALSAVISGHNLSAQTYT* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0809 202 Pfam Casparian strip membrane protein domain 54 184 IPR006702 -
Apr10g0809 202 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 21 201 - -
Apr10g0809 202 MobiDBLite consensus disorder prediction 1 37 - -
Apr10g0809 202 PANTHER CASP-LIKE PROTEIN 4B1 21 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0809 Apr-Chr10 20110120 20112506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0809 - - gmx:100527392 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0809 10 20110120 20112506 Apr10g0809 10 20110120 20112506 ECH
Apr4g2099 4 29887833 29889536 Apr10g0809 10 20110120 20112506 PCT