Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0780 ATGGATCAGATATTGAACAAAGTCGGAACCTATTGGTTCAACCAGAAAGCCTCCAAGGAGCTCAATTCCGTTGGTGACGACATCAATTCGCTATCAAGCAGTATTGAAGGGGGAACCAAATGGTTGGTCAACAAAATAAAAGGAAAGATGCAAAAGCCACTACCAGAGTTACTAAAGGAGTATGATCTACCAATTGGAATCTTTCCTCGTGATGCAACAAACTATGAATTCAATGAAGAGACAGGAAAGCTTGTTGTGTACATTCCTCAAGTTTGTGAAGTAGGCTACAAGGATTCATCAGTCCTGCGGTTCTTCACCACCGTGACTGGTTATCTGGAGAAAGGAAAGCTAGCAGACATTGAGGGAATGAAGACAAAGGTGTTGATCTGGGTAAAAGTGACGTGCATTTCATCGGAGGGATCAAAGCTCCAAGTGACAGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCATATGAGGTTACAAGAGATGGTGTATGCGTAGATAAGTTCTAA 513 0.425 MDQILNKVGTYWFNQKASKELNSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIGIFPRDATNYEFNEETGKLVVYIPQVCEVGYKDSSVLRFFTTVTGYLEKGKLADIEGMKTKVLIWVKVTCISSEGSKLQVTAGMKKTRSREAYEVTRDGVCVDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0780 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
Apr10g0780 170 Gene3D - 32 170 IPR036758 -
Apr10g0780 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Apr10g0780 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Apr10g0780 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0780 Apr-Chr10 19477993 19481271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0780 - - gmx:100500143 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0780 10 19477993 19481271 Apr10g0780 10 19477993 19481271 ECH
Apr4g2072 4 29581421 29584816 Apr10g0780 10 19477993 19481271 PCT