Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0779 ATGGCCCTTTCTTGCTCCAAAGTTTCAACCTTTTCCCTCTCACCTGTTGTGGGTGATGCTCCAAAAAACCTCGCTTTTTCATCTTCTGTGAGCTTTGTTCTCTCTCCTTCTTTTTTGAAAATTTCTAAGGTTGGTGGAAACAGGAACTTGAGGGTGTGTGCTGCTTCAAATGCGCCAGCACCACTCACTGGGGTGATTTTTGAACCCTTTGAAGAGGTCAAGAAGGAATCTCTTTCTGTTCCAGTGGCACATCATGTTTCCTTGGCTCGTCAGAATTATGCTCCTGACCCTGAAGCTGCAATCAATGAGCAGATAAACGTGGAATACAACGTTTCCTATGTGTACCATTCCATGTTTGCATACTTCGACAGGGACAACGTAGCTCTCAAGGGACTTGCCAAGTTCTTTAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCGGAAAAGCTTATGAAATATCAGAACATTCGTGGTGGACGAGTTGTGCTGCACCCTATCACGAGTCCTCTCTCAGAATTTGAGCATGTAGAAAAAGGGGATGCATTGTATGCTATGGAATTAGCTTTGTCTTTGGAGAAGTTGACCAATGAAAAGCTTCTCCATGTTCACAGTGTGGCAGAAAGTAACCATGATGTTCAACTGGCAGATTTCATTGAGAGCGAGTTTTTGTATGAACAGGTTAAAGCAATTAAAAAGATAGCAGAATATGTGACTCAACTGAGATTGGTTGGAAAGGGTCATGGTGTCTGGCACTTCGATCAAAGTCTTCTCCATGATGAACATCATGTATAA 792 0.4268 MALSCSKVSTFSLSPVVGDAPKNLAFSSSVSFVLSPSFLKISKVGGNRNLRVCAASNAPAPLTGVIFEPFEEVKKESLSVPVAHHVSLARQNYAPDPEAAINEQINVEYNVSYVYHSMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPITSPLSEFEHVEKGDALYAMELALSLEKLTNEKLLHVHSVAESNHDVQLADFIESEFLYEQVKAIKKIAEYVTQLRLVGKGHGVWHFDQSLLHDEHHV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0779 263 PANTHER FERRITIN-2, CHLOROPLASTIC 1 261 - -
Apr10g0779 263 PANTHER FERRITIN 1 261 IPR001519 GO:0006826|GO:0006879|GO:0008199
Apr10g0779 263 CDD Euk_Ferritin 98 254 - -
Apr10g0779 263 Gene3D - 60 261 IPR012347 -
Apr10g0779 263 ProSitePatterns Ferritin iron-binding regions signature 1. 142 160 IPR014034 -
Apr10g0779 263 ProSiteProfiles Ferritin-like diiron domain profile. 91 244 IPR009040 -
Apr10g0779 263 ProSitePatterns Ferritin iron-binding regions signature 2. 211 231 IPR014034 -
Apr10g0779 263 SUPERFAMILY Ferritin-like 81 258 IPR009078 -
Apr10g0779 263 Pfam Ferritin-like domain 99 242 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0779 Apr-Chr10 19468078 19471267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0779 K00522 - gmx:547988 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0779 10 19468078 19471267 Apr10g0779 10 19468078 19471267 ECH
Apr4g2070 4 29534964 29537456 Apr10g0779 10 19468078 19471267 PCT