Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0738 ATGATGGCATGTCAAGAGTGGCCTGAGCCAGTGATTCGAGTCCAAGCCTTGGCCGAAAGTGGCTTAACCACAATCCCTGAACGTTTCATAAAGCCAAAGTCCCAAAGGGTAGCCACTAGCACTTCTGCATCAAACCAAGTTTATTGGTCTAACAACAACATCAATATCCCAGTGATTGATATGCAACATATCTATGGTAAGGACCATAGGCTAAGGGTGGAAACACTAGAGCGTGTTTCTGAGGCATGTAGGGAATGGGGGTTCTTCCAAGTGGTGAATCATGGGGTGAGGCATGAGTTGATGAATGATGCGAGGGAGCTGTGGCGCGAGTTCTTTAACCAACCACTTGAGGTTAAAGAGGAGTATGCAAATTCACCACTTACTTATGAGGGGTATGGAAGTAGGTTGGGAGTTAAAAAAGGTGCTATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTGTTCCCTTAGGGACCAAGCCAAGTGGCCTACCCTACCAGCTTCCTTAAGGCATGTGATTGCTGAATATGGTGAGGAAGTTGTTAAGCTAGGAGGAAAGATACTTGAGATAATGTCAATAAATCTTGGGTTGAGAAAGGATTTCCTTCTAGATGCATTTGGTGGGGAAAGTGATCTTGGTGCTTGCCTAAGGGTGAATTTCTATCCAAAGTGCCCACAACCTGACCTCACTCTTGGCCTATCCTCTCACTCAGACCCTGGTGGTATGACCATTCTTCTCCCTGACGATAATGTGTCTGGACTTCAAGTACGAAGAGGAGAAGATTGGATCACTGTTAAGCCTGTCCCAAATGCTTTCATCATCAACATTGGTGACCAAATTCAGGTGCTGAGCAATGCAATTTACAAGAGTATAGAGCACAGGGTGATCGTGAACTCAAACAAAGATCGAGTTTCATTGGCCTTCTTTTACAATCCTAGGAGCGATATACCGATTCAACCTGCTAAGGATCTTGTGACTGAGGATAGGCCAGCACTCTACCCAGCAAAGACATTTGATGAGTACAGACTTTACATTAGGACAAAAGGACCATCTGGAAAAGCGCAAGTTGAATCTTTGACTTCCAAATAA 1098 0.4444 MMACQEWPEPVIRVQALAESGLTTIPERFIKPKSQRVATSTSASNQVYWSNNNINIPVIDMQHIYGKDHRLRVETLERVSEACREWGFFQVVNHGVRHELMNDARELWREFFNQPLEVKEEYANSPLTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRDQAKWPTLPASLRHVIAEYGEEVVKLGGKILEIMSINLGLRKDFLLDAFGGESDLGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDDNVSGLQVRRGEDWITVKPVPNAFIINIGDQIQVLSNAIYKSIEHRVIVNSNKDRVSLAFFYNPRSDIPIQPAKDLVTEDRPALYPAKTFDEYRLYIRTKGPSGKAQVESLTSK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0738 365 PRINTS Isopenicillin N synthase signature 79 96 - -
Apr10g0738 365 PRINTS Isopenicillin N synthase signature 275 301 - -
Apr10g0738 365 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 360 - -
Apr10g0738 365 SUPERFAMILY Clavaminate synthase-like 10 350 - -
Apr10g0738 365 Gene3D - 9 350 IPR027443 -
Apr10g0738 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 214 315 IPR005123 -
Apr10g0738 365 Pfam 2OG-Fe(II) oxygenase superfamily 217 315 IPR044861 -
Apr10g0738 365 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 360 - -
Apr10g0738 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 166 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0738 Apr-Chr10 18607195 18610787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0738 14 362 Glycosyltransferase AT5G59530 32.303 1.26e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0738 - - pvu:PHAVU_010G000300g 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0738 10 18607195 18610787 Apr10g0738 10 18607195 18610787 ECH