Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0735 ATGGTCGGAAAAACCATGTCCATGGCGGCGACTTCGCGTGAAAAGTTAGCGAGTCTTGTGAACTCTGCCAAGTTGGCCATCGACATCCCCTCCAAACTCGAGTCGTTGCGCCAACTGAGGCACGAACTTCCCCAAGAAGACCCCGTTCTTCTCACCGAGTTCCTCCCTTCACTGTTTGACTTCCACTCCGATCGCTTCGGTCCCGTTCGCAAATTCATCACCGAGATGCTTGGTGAGATTGGATTGAAGAACACGGAGTTTTTGCCTGACATTGTGCCTGTGCTTATCAATATCTTGGATGATGACACGCCGGCGGTTGTTCGACAAGCTATACTGTGTGGAACCGATTTGTTTCGCTCCACGCTTGAGAAAATTGCGATTCAGGGTCTATATTCTAGTGATTTAGACAGTGCACTTGAATCTGCATGGGCATGGATGATTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGGAGGTGGTGGAGCAAAGCTGCTGGCATTGAAGTTTGTTGAAGCAGTTATTCATCTTTACACACCTGATCCCAATGGTTCCTCAGAGCCCACTTCTCATCAAGGAAGGCCTGCTGAATTTAATATATCATGGCTGAGGCGGGGTCATCCAGTACTTAATGTTGGAGATTTGTCAATTGAAGCCAGCCATAGTTTGGGTCTCTTGCTTGATCAACTCAGGTTTCCAAGTGTGAAGTCTCTTAGTCACTCAGTGATCATTGTGCTAATTAAAAGCCTTTCAGCCATTGCAACAGACAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGCTTGGAACCCTCGAGCTCTGTTGTGAGTGGGATCTGTGTAACTGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACTTGCTCAAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGGTGCCTTGAAGGAAATGCAGTCTGAAGGAAAGGCAGATCAGGTGTTCCACTTAATCCCTGCAAGTAATGGAAGTATAAAGAGAGAGAAGGATGATCAATCTGTTATCAAGGAAGAGGAACGTGCAGTAAATTCTTGTGATTCAATGCCCAGTAATTTGGGAAGAAAGCGATCTGGATCACAAAATGGAGGTGATTTAGCTGAAGATGATGTGCCTGGAAAACGTGTAAAGACATCATTCATTGTGAAAGAACCTAAGAAAGAGTTAGATGAAGGTACCAGTGCGGACTCTCAGGATGACACACAGTCAACTGTACCAATACAATCAAAAGGAGATGTGGAGAATGGGCCTGTACAGCAACTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAAGCTGTTGCATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCGAAACCTACCTCCAAATTACCCTAATGCTGAAGGAAATGATGAACAGCTGCATGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGGTGTTATGTCGCTTTGTAGTACTTTTCCGCCAATAGCGTCCCTTCTTGACGCCCATCAACCAGTGTCCAACGAGGTAAAGCCTCAAGGGGAGGAAGAAATTTCTGCAATTGCTGAAGATAGTGCTGTTGAGCATTCTGGCATGAATCTTTCATCTGAAAATGTACCATCGCCTACTGATTTTCCATCTTCTGATGCCAGTATACCTGGAGTGGAGAATGGCTGCACAACTATACCTTCTGACATCCATGATGTTGGAAACTTAGAGAGCGGCATCCCTGGCCTGGATTCCTTTGGTCGTAGTGATGCCTTGTCAGAAACTTTGGCTCCCTCCTCATTGGCTTCCACTGATATACATCTAGAAGATGGCAGTCAAGAGCAAGTTATGAGTTTGGATCAGAGGTCACCTCTGAACTTAGTTCCGTCAATATCAACAGATAGATCTGAGGAGCTGAGCCCAAAAGCGGGTGTTACAGATGTCAATAGCCTGGTGTCCTCAACAGCTACTTCTGTTGTGTTGCCTCCCCGTTTAATCTTGCCAAAGATGATTGCTCCTGTTGTTGACCTTGCAGATGAACAAAAAGATCATTTGCAAAAGTCATGTTTTATGCATATAATTGATGCATATAAGCAAATAGCTGTAGCTGGTGGTTCCAAAGTCCGATTTTCAATACTTGCTTATTTAGGAGTTGAGTTTCCCTTGGAATTAGACCCATGGAAACTATTACAGAAGCATATTTTGATTGATTATACAAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTTTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCAACAACTGCAGCTTCTGTATATGAAAAATTTCTCCTTACAGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAACCCGTTTTAAAAATTTTAGAAAACATGTGTTCTCCTGGAAATGAGGATAAAGTTGAAAAGGAGTCACACTCCCCGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTTAGGCCACCCATTCGAGATACTTGCTTACAAATTGCTTTACAGAGTGCAGTGCATCACATGGAAGAAGTACGAATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTATCCTTTGCCATCCATTTCTCTGAAAATAGAAGATTTTGCCAAAGAAATGCTTTTCTCAGTGATGAGTGCTGATGCATCTGAGGCAACTGATGCTGAAGGGTCCATTGTTGATTCACAGAAGGGTCCTGATATTGAAAAGGTTTCAAATGAACAATCATCATTAAGTGGCAACACTAAAGATGTCTCAGATAATCATCAACCATGCTCATCTGAGAGTGTCTCGCCAGTTTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTACTTTGCTTTGTGTACGAAGAAACATTCTCTTTTTCGCCAAATATTTGTCATCTATAGAAGCACATCAAAGGCAGTGAAACAGGCAGTACATCGTCAAATTCCAATACTAGTGCGGACAATGGGCTCATCTTCAGATCTCCTTGAAATTATTTCTGATCCCCCAAATGGAAGCGAGAATCTTTTAATGCAGGTGTTGCATACACTTACAGATGGTACGACCCCTTCTAAGGATTTAGTATTTACTGTGAAAAGGTTGCATGATTCAAAACTTAAGGATGCAGAGGTTCTTATTCCGATATTACCATTCCTATCAAATGACGAGGTAATGCCGATTTTTCCTCACATTGTGAATCTTCCTTTGGAGAAGTTCCAAGCAGCACTTGGTCGCATATTGCAGGGATCATCACAATCTGGTCCAGTGCTCACTCCGGCTGAAGTTTTAATTGCTATTCATGGAATTGATCCTGAAAGAGACGGAATTCCCTTAAAAAAGGTCACAGATGCATGCAATGCTTGCTTTGAGCAGCGGCAAGTTTTTACTCAAGAAGTTCTTGCCAGAGTTTTGAATCAATTGGTTGAGCAGATTCCTCCTCCTTTACTGTTCATGCGTACAGTATTACAAGCAATTGGTGCTTTTCCAACTCTGGTGGACTTTATCATGGGAATTCTTTCTCGCCTTGTGACCAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGTTGACAAAACCACAATCATTTGACATTTTGCTTCAGCTGCCTCCAGCACAATTGGAAAGTGCATTAAATAAAATTGCAGCCCTAAAGGCACCATTGATTGCTCATGCTAGCCAGCCGGATATACAATCTAAACTTCCCAGGGCTATACTGGTTGTTCTGGGAATTGCTTCAGATACTCAGGTTTCAACTCAGCCACAAACTAGTCAAACACAAACTGGCGAGACAAGCAACTCAGACAAAAAGGACACGGTGATAGAAAAATCTAAAGAATCATCTACAGCGAGCTAA 4020 0.4281 MVGKTMSMAATSREKLASLVNSAKLAIDIPSKLESLRQLRHELPQEDPVLLTEFLPSLFDFHSDRFGPVRKFITEMLGEIGLKNTEFLPDIVPVLINILDDDTPAVVRQAILCGTDLFRSTLEKIAIQGLYSSDLDSALESAWAWMIKFKDKVYSIAFQHGGGGAKLLALKFVEAVIHLYTPDPNGSSEPTSHQGRPAEFNISWLRRGHPVLNVGDLSIEASHSLGLLLDQLRFPSVKSLSHSVIIVLIKSLSAIATDRPAFYGRILPVLLSLEPSSSVVSGICVTAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEMQSEGKADQVFHLIPASNGSIKREKDDQSVIKEEERAVNSCDSMPSNLGRKRSGSQNGGDLAEDDVPGKRVKTSFIVKEPKKELDEGTSADSQDDTQSTVPIQSKGDVENGPVQQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRNLPPNYPNAEGNDEQLHDISMIGSDDKAKYPPSFVAGVMSLCSTFPPIASLLDAHQPVSNEVKPQGEEEISAIAEDSAVEHSGMNLSSENVPSPTDFPSSDASIPGVENGCTTIPSDIHDVGNLESGIPGLDSFGRSDALSETLAPSSLASTDIHLEDGSQEQVMSLDQRSPLNLVPSISTDRSEELSPKAGVTDVNSLVSSTATSVVLPPRLILPKMIAPVVDLADEQKDHLQKSCFMHIIDAYKQIAVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEKFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKPVLKILENMCSPGNEDKVEKESHSPNADRVTQGLSAVWSLILLRPPIRDTCLQIALQSAVHHMEEVRMKAIRLVANKLYPLPSISLKIEDFAKEMLFSVMSADASEATDAEGSIVDSQKGPDIEKVSNEQSSLSGNTKDVSDNHQPCSSESVSPVSVSEAQRCMSLYFALCTKKHSLFRQIFVIYRSTSKAVKQAVHRQIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTTPSKDLVFTVKRLHDSKLKDAEVLIPILPFLSNDEVMPIFPHIVNLPLEKFQAALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQVFTQEVLARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFDILLQLPPAQLESALNKIAALKAPLIAHASQPDIQSKLPRAILVVLGIASDTQVSTQPQTSQTQTGETSNSDKKDTVIEKSKESSTAS* 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0735 1339 PANTHER SYMPLEKIN/PTA1-RELATED 1 1241 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 556 575 - -
Apr10g0735 1339 Pfam Symplekin/PTA1 N-terminal 104 322 IPR032460 -
Apr10g0735 1339 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1241 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 955 984 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 411 428 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 940 984 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 555 575 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 338 428 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 360 374 - -
Apr10g0735 1339 Gene3D - 2 352 IPR011989 -
Apr10g0735 1339 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 383 409 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 339 359 - -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 1306 1322 - -
Apr10g0735 1339 SUPERFAMILY ARM repeat 33 1197 IPR016024 -
Apr10g0735 1339 MobiDBLite consensus disorder prediction 1306 1339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0735 Apr-Chr10 18466512 18495107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0735 K06100 - gmx:100779360 2214.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0735 10 18466512 18495107 Apr10g0735 10 18466512 18495107 ECH