Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0729 ATGTTCCAAATTGTCAACATGACAGAGACAGAGGAGAAAGCCATCGTGACGTGGCGCAACATCCCAAACCTCAAATCCTCCTTCAACGACGTCGTTCCATTCTGCCACCGCAAACCGCTCCCAAACGACGCCGTTCCCATTTTCACCACCGACAGTGGCCTCCGCTGTAAATTCGCGAGCGTGTCAGTGGCAGAAAGGAAATCCGGCAAGGAATTCACGCCGACGGCGACTCAGCTTTTGAAGCACCCACTCGCCGTGGTCGCATTCGTGCCTAAAGATGTTGCCTTGTTTCTCGCCGGAGCCATCGCCGGCGCCGCTGCGAAAACCGTCACGGCACCGCTCGACCGCATCAAGCTCCTCATGCAGACTCATGGCGTCCGAGTTGGACAAGAAAGTGTTCAGAAATCGATTGGTTTAATTGAGGCCATAACCGTAATAGGGAAGGAAGAAGGCATTAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTGATTCGGGTTATACCTTATAGTGCTGTCCAGCTTTTTGCTTATGAAATTTACAAGAAAATATTCAAGGGGAAAAATGGCGAGCTCTCTGTTGTGGGGAGACTTGCAGCTGGTGCTTTTGCTGGCATGACATCAACTTTTATAACATACCCATTAGATGTCCTGAGATTAAGATTAGCTGTTGAACCTGGTTATAGAACAATGTCAGAGATTGCCTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTCTACTATGGCCTTGGGCCATCTCTGATTGGAATAGCTCCATATATTGCAGTGAACTTTTGTGTTTTTGACTTATTAAAGAAATCATTGCCAGAGAAATATCAAAAGAGAACTGAAACATCTCTAATCACTGCCGTTCTCTCCGCATCTCTTGCCACACTTACATGCTATCCTTTGGACACAGTGCGAAGACAGATGCAATTGAAGGGTACACCTTACAAGACAGTATTAGATGCCATTACAGGTATTGTGGCACGGGATGGAATTATTGGTTTGTATCGAGGGTTTGTGCCCAATGCTTTGAAAAACCTACCAAATAGCAGCATCAGGCTTACTACATATGACATTGTCAAACGCCTAATTGCAGCTAGTGAGAAGGAGTTAGAAACAATTACCGAGGAAAACCGCAACAAACAAAAGAAAAACCAATAG 1167 0.461 MFQIVNMTETEEKAIVTWRNIPNLKSSFNDVVPFCHRKPLPNDAVPIFTTDSGLRCKFASVSVAERKSGKEFTPTATQLLKHPLAVVAFVPKDVALFLAGAIAGAAAKTVTAPLDRIKLLMQTHGVRVGQESVQKSIGLIEAITVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKNGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEIALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLITAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAITGIVARDGIIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKELETITEENRNKQKKNQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0729 388 PANTHER ADP/ATP CARRIER PROTEIN 13 378 - -
Apr10g0729 388 Coils Coil 359 388 - -
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 96 109 IPR002067 GO:0055085
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 109 123 IPR002067 GO:0055085
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Apr10g0729 388 PRINTS Mitochondrial carrier protein signature 290 312 IPR002067 GO:0055085
Apr10g0729 388 PANTHER SOLUTE CARRIER FAMILY 25 13 378 - -
Apr10g0729 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 274 IPR018108 -
Apr10g0729 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 91 183 IPR018108 -
Apr10g0729 388 Gene3D Mitochondrial carrier domain 93 366 IPR023395 -
Apr10g0729 388 Pfam Mitochondrial carrier protein 285 367 IPR018108 -
Apr10g0729 388 Pfam Mitochondrial carrier protein 190 277 IPR018108 -
Apr10g0729 388 Pfam Mitochondrial carrier protein 95 187 IPR018108 -
Apr10g0729 388 SUPERFAMILY Mitochondrial carrier 94 361 IPR023395 -
Apr10g0729 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 281 365 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0729 Apr-Chr10 18358405 18362469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0729 11 385 Organic Solute Cotransporters AT3G51870 68.063 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0729 K14684 - gmx:100796878 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0729 10 18358405 18362469 Apr10g0729 10 18358405 18362469 ECH