Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr10g0727 | ATGGCCGTCGTTGGCGTGTTGGCGCTACAAGGATCTTTCAACGAACACATAGCCGCTCTGAGAAGGTTAGGGGTGAAAGGCGTGGAGATTCGAAAGCCAGAACAGCTTCACACCGTTGGTTCCCTCATCATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCTGAATACCACAATCTGTTTCCTGCATTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCTGCGCTGGGCTTATATTCTTGGCAAACAAAGCTATAGGACAGAAGACTGGTGGACAACAATTGGTTGGTGGACTTGACTGTACTGTGCATAGAAATTTCTTTGGAAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTCCGTGCCAGATCTTGCTTCCAAGGAAGGTGGTCTTGACACATTTCGGGGCATTTTTATTCGTGCCCCTGCAATTCTCGAAGCAGGGCCAGAAGTTCAGGTGCTGGCTGATTATCTTGTACCTTCTAGCAGCTTGTTGAGTGCTGATTTCTCTTTTGAAGGCAAAAAGGAGAATGCTGAGGAAGAAAGTAAAGTTATAGTTGCCGTGAGACAAGGGAACGTACTAGGGACTGCTTTCCATCCTGAATTGACAGCAGATACTCGATGGCATAGTTATTTCTTGAAAATGGCAAATGAGATTGGAGAAGAGGCGTCAAGTAGCCTTGTTCCTGCGCAAGTTGGTACAAGTTACAATCATCAATCCTGGAATGATCTTCCTATCTTTCAATAG | 759 | 0.4651 | MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLHTVGSLIIPGGESTTMAKLAEYHNLFPALREFVQMGKPVWGTCAGLIFLANKAIGQKTGGQQLVGGLDCTVHRNFFGSQIQSFEAELSVPDLASKEGGLDTFRGIFIRAPAILEAGPEVQVLADYLVPSSSLLSADFSFEGKKENAEEESKVIVAVRQGNVLGTAFHPELTADTRWHSYFLKMANEIGEEASSSLVPAQVGTSYNHQSWNDLPIFQ* | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr10g0727 | 252 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 3 | 229 | - | - | |
| Apr10g0727 | 252 | CDD | GATase1_PB | 4 | 217 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | TIGRFAM | PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 | 4 | 161 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | PANTHER | - | 2 | 251 | - | - | |
| Apr10g0727 | 252 | Hamap | Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. | 4 | 219 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | Pfam | SNO glutamine amidotransferase family | 6 | 220 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | PIRSF | Glut_amidoT_SNO | 1 | 224 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | ProSitePatterns | PdxT/SNO family family signature. | 41 | 51 | IPR021196 | - | |
| Apr10g0727 | 252 | ProSiteProfiles | PdxT/SNO family profile. | 3 | 221 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | SUPERFAMILY | Class I glutamine amidotransferase-like | 3 | 219 | IPR029062 | - | |
| Apr10g0727 | 252 | PANTHER | PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO | 2 | 251 | IPR002161 | GO:0004359|GO:0042819|GO:0042823 | |
| Apr10g0727 | 252 | Gene3D | - | 1 | 230 | IPR029062 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr10g0727 | K08681 | - | gmx:100786227 | 437.958 |