Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0721 ATGTCATCATCCTTTGGCAGCTCCACCCAGCCGTTCGACGAAGACGGCGCCTTCGTCGGCTACGATCCCCGGCTCCAGTCGCAGCGCTTCGACTCGTTCTCAAACTTCGACGCCGACTCAGTCAAGGACTCGGCTGGTGACTCGTCCCCGATTTTCGGCGGTGGCTCGTACAGCGCCGGAGACGACGTGTTCTCTTCTCAGGCGGTGCCGGAGACTCCCTCCCCGCCGTCGATCTACTCCGCCCCCAGCGGATTCGAGGCGTTCTCTCCGGAGCAGAATGGGGAGGGCGTGGACGGAAGTCTCGGCGCCTCCGGTGGCCCGATCTTGCCTCCTCCGACGGATATGGCGGCGGAGGGGGGGTTTGCACTGAGAGAGTGGCGAAGGCAAAACGCGATTCGATTGGAGGAAAAGGAGAAGAAGGAGAAAGAAATGCGTATGCAGATCATAGAGGAAGCGAAAGAGTACAAAATTGAGTTCTACAAAAAGCGCGAGGTTAATGTTGAGAACAACAAGGCTTCTAACAGGGAAAGACAGAAGCTATTTTTGGCAAGCCGGGAAAAGTTCCATGCTGAAGCTGACAAAAACTACTGGAAGGCAATTGGTGAACTTATACCACATGAAGTGCCTGCAATAGAGAAAAGAGGGAAAAAGGAGAAAGAGAAAAAGCCATCTATTGTTGTAATTCAGGGGCCAAAGCCAGGGAAGCCAACTGAGCTTTCAAGAATGCGCCAGATATTACTGAAGCTCAAGCATAATCCCCCACCACATATGAAGCCCAAGCCTCCCCCATCTTCAGAAACCAAAAAGGACGCTAAAACTGGACCCCCTGATGGAGCTAGTACAAGTACTACGCCTCCCAGGGTTGTGCATGTGGCAACTCCTGAGGCTGTTGCTGCAGCTTGA 903 0.5371 MSSSFGSSTQPFDEDGAFVGYDPRLQSQRFDSFSNFDADSVKDSAGDSSPIFGGGSYSAGDDVFSSQAVPETPSPPSIYSAPSGFEAFSPEQNGEGVDGSLGASGGPILPPPTDMAAEGGFALREWRRQNAIRLEEKEKKEKEMRMQIIEEAKEYKIEFYKKREVNVENNKASNRERQKLFLASREKFHAEADKNYWKAIGELIPHEVPAIEKRGKKEKEKKPSIVVIQGPKPGKPTELSRMRQILLKLKHNPPPHMKPKPPPSSETKKDAKTGPPDGASTSTTPPRVVHVATPEAVAAA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0721 300 PANTHER CLATHRIN LIGHT CHAIN 3 1 296 - -
Apr10g0721 300 MobiDBLite consensus disorder prediction 209 225 - -
Apr10g0721 300 MobiDBLite consensus disorder prediction 36 116 - -
Apr10g0721 300 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g0721 300 MobiDBLite consensus disorder prediction 209 300 - -
Apr10g0721 300 PANTHER CLATHRIN LIGHT CHAIN 1 296 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Apr10g0721 300 Pfam Clathrin light chain 122 252 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Apr10g0721 300 Coils Coil 123 154 - -
Apr10g0721 300 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0721 Apr-Chr10 18141902 18144173 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0721 - - aprc:113850159 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0721 10 18141902 18144173 Apr10g0721 10 18141902 18144173 ECH