Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0710 ATGTACTCTACTTCTCTCTCTATAAATCCCTCTCTCTCTCCTCCTTTTCTTTCGTCTGTCACCACCTTTACTACCTCTTCTTCTTCTCTTTACAACTCTACTAGATTTAGTTGCTTCCACCCTCTTAGATCAAAACCCATTACACCCTTTTGGAAAAAGACAGGTTTTTGCTCTATACAAGGGTTGAAGAGTGTGAAAAGAAGAAAAACTTTGGTGCTTGGAGCCACGAACATGACCATAGCCGAGGATAGTTTGCTTGAGGTCGTGGAGGAGGAAGAGGGTCCCCCTGACTCTGCTTTGCTTGATACTGAGAACAATTCTAGGCCCCGTAGGATTGCTCTCTTTGTTGAACCTTCTCCTTTTGCGTATGTCTCTGGATACAAAAATCGTTTTCAGAATTTTATAAAATACCTTCGCGAAATGGGAGATGAGGTGATGGTTGTGACAACACATGAAGGAGTACCCAAGGAATTTTACGGAGCCAAATTAATAGGATCCCGGAGCTTCCCTTGTCCCTGGTATCAGAAGGTACCCCTGTCTTTGGCACTTAGTCCAAGAATAATTTCGGCAGTTGCCCAGTTTAAGCCTGACATAATACATGCATCATCACCTGGCATAATGGTTTTTGGTGCTCTTATAATTGCAAAGCTTCTGTCTGTTCCAATTGTCATGTCCTATCATACCCATGTACCAGTATATATTCCAAGATACACCTTTAGCTGGCTTGTGCAACCCATGTGGTTGATCATAAAATTTCTACATAGAGCAGCTGATCTAACTCTGGTGCCATCAGCTGCCATTGGAAGGGATCTCGAAGCAGCTAGAGTAACAGCAGCTAACAAGATCCGTCTTTGGAACAAGGGTGTTGATTCTGAAAGTTTCCATCCCCAATTCAAATCCGAGGAAATGCGATTAAGACTGAGCAATGGTGAACCCGAGAAGCCCTTAATAGTTCATGTTGGACGGCTTGGAGTCGAGAAGAGTTTAGATTTTTTCAAAAGCATCATGGATAGGCTTCCTGAAGCAAGAATTGCTTTTATTGGAGATGGACCCTACAGGGAGGAGTTAGAAAAAATGTTTGAAGGTATGCCTGCAGTGTTCACAGGAATGTTAGGAGGGGAAGAACTATCTCAAGCATATGCAAGTGGTGATGTCTTTGTTATGCCTTCAGAGTCAGAGACACTTGGACTTGTTGTTTTAGAGGCCATGTCTTCAGGGATTCCTGTGGTGGGAGCACGTGCTGGCGGCATCCCAGACATAATCCCTGAAGACCAAGATGGCAAAATTGGCTATCTCTACACCCCAGGTGATCTTGAAGACTGCTTGAGCAAATTAAAGCCTCTGTTACATGATAAAGAGTTGAGAGAAATCATGGGAAAAGCTGCACGTATTGAGATGGAGAAGTATGATTGGAGGGCAGCCACTAGAAAGATTCGCAACGAAAATTACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAGCTTTTGAGGCCCTTTCAATGGCTTGCTAAACGCATTTTCCCATCACCAGAAGCAAACTTGTAG 1551 0.4371 MYSTSLSINPSLSPPFLSSVTTFTTSSSSLYNSTRFSCFHPLRSKPITPFWKKTGFCSIQGLKSVKRRKTLVLGATNMTIAEDSLLEVVEEEEGPPDSALLDTENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWLIIKFLHRAADLTLVPSAAIGRDLEAARVTAANKIRLWNKGVDSESFHPQFKSEEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFFKSIMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLHDKELREIMGKAARIEMEKYDWRAATRKIRNENYNAAIWFWRKKRAQLLRPFQWLAKRIFPSPEANL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0710 516 Gene3D Glycogen Phosphorylase B; 307 469 - -
Apr10g0710 516 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 479 - -
Apr10g0710 516 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 23 514 - -
Apr10g0710 516 Pfam Glycosyltransferase Family 4 129 292 IPR028098 -
Apr10g0710 516 Gene3D Glycogen Phosphorylase B; 111 306 - -
Apr10g0710 516 CDD GT4-like 111 481 - -
Apr10g0710 516 Pfam Glycosyl transferases group 1 312 463 IPR001296 GO:0016757
Apr10g0710 516 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 23 514 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0710 1 432 Glycosyltransferase AT5G01220 70.872 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0710 K06119 - gmx:100780899 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0710 10 17671420 17675547 Apr10g0710 10 17671420 17675547 ECH