Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0582 ATGGGCTTGGTGGCAATCACATGGCCAAATTATATAAGAAAGCGTCTTCCACTAACAATAAGGTTTCTTCATACCATGAAAGGTCACCAGTTAGGACAAATTTTACTATCTCCTCCTCTTCCATCTCTGGATCTTCCTGACATCTGGAATCCTAATTCTTCATGTCAGAGTATTCCGACAACACATAGTAGCTTTAAAGAACAGACTGCTGTAGTTCTTGATGGAAAGTTGATATCAATGGAAATCAGATCTAAAATAGCTACTAAGGTAAGGCAAATGAAGAAATGCCTAGGAAAGGTTCCTGGATTAGCGGTAATTTTGGTGGGCCAGAGAAGGGATTCTCAAATTTATGTTCGTAACAAGATAATGGCATGTGAAGAAGTTGGAATCAAGTCTTTGGTGACTGAATTACCTGCTGATTGTGCAGAAACGGATGTTCAAAATGCTGTCATGAAATTTAACAAGGATCCATCCGTCCACGGTATTCTTGTGCAACTTCCTCTACCACAACATCTAGATGAGGAAAAAGTTCTTGACGCTGTATCCCTGGAAAAAGATGTGGATGGTTTTCATCCTCTTAATATGGGGAATCTTGCCATGAGAGGAAGGGAACCACTGTTTATTCCGTGTACTCCGAAGGGTTGCATCGAGTTATTGATCAGATATGGAGTTGAGATTATGGGGAAGAAAGCCGTAGTGATTGGAAGAAGCAATATTGTTGGGTTGCCGGCATCCTTGTTATTGCAGAGACACCATGCGACAGTCACTGTCGTACATGCCTTCACAGAGAACCCTCAACATATCACCTCAGAAGCTGATATTGTAGTTTCAGCTGCTGGAGTGCCTAAATTGGTCCGTGGGAACTGGATAAAACCCGGTGCAACTGTGATAGATGTTGGAACAACACCGGTTGAGGATCTTAGCTGCGAGGATGGTTATCGTCTCACAGGTGACGTGTGCTATGAAGAAGCCATAAAGGTGGCATCCGTCATCACTCCTGTGCCTGGTGGGGTTGGGCCAATGACCGTTGCTATGCTACTATGTAACACATTAGATTCTGCAAAACGCATGCTCAATTTTACGTGA 1086 0.4309 MGLVAITWPNYIRKRLPLTIRFLHTMKGHQLGQILLSPPLPSLDLPDIWNPNSSCQSIPTTHSSFKEQTAVVLDGKLISMEIRSKIATKVRQMKKCLGKVPGLAVILVGQRRDSQIYVRNKIMACEEVGIKSLVTELPADCAETDVQNAVMKFNKDPSVHGILVQLPLPQHLDEEKVLDAVSLEKDVDGFHPLNMGNLAMRGREPLFIPCTPKGCIELLIRYGVEIMGKKAVVIGRSNIVGLPASLLLQRHHATVTVVHAFTENPQHITSEADIVVSAAGVPKLVRGNWIKPGATVIDVGTTPVEDLSCEDGYRLTGDVCYEEAIKVASVITPVPGGVGPMTVAMLLCNTLDSAKRMLNFT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0582 361 Gene3D Leucine Dehydrogenase, chain A, domain 1 75 352 - -
Apr10g0582 361 CDD NAD_bind_m-THF_DH_Cyclohyd 184 355 IPR020631 GO:0004488
Apr10g0582 361 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 73 188 IPR020630 GO:0004488
Apr10g0582 361 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 191 356 IPR020631 GO:0004488
Apr10g0582 361 Hamap Bifunctional protein FolD [folD]. 70 358 IPR000672 GO:0004488
Apr10g0582 361 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 49 361 - -
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 101 123 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 142 169 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 177 198 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 224 244 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 273 302 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 314 330 IPR000672 GO:0004488
Apr10g0582 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 331 349 IPR000672 GO:0004488
Apr10g0582 361 Gene3D - 73 334 - -
Apr10g0582 361 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 70 189 IPR046346 -
Apr10g0582 361 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 335 343 IPR020867 GO:0003824
Apr10g0582 361 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 49 361 - -
Apr10g0582 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 190 355 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0582 Apr-Chr10 12931479 12935847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0582 - - gmx:100791604 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0582 10 12931479 12935847 Apr10g0582 10 12931479 12935847 ECH