Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0580 ATGACAAAGGTATACCCAAACACAGCCGATGAATCTGTGTCGATAGACGGCAACAGGGATGCAGTGGCAGTGGTGTTGACAGTGTGGAAGAAGTCTTTGTTGCTAAACTGCAATGGATTCACGGTTTTGGATGGGCAAGGGAATCTGGTATTTAGGGTAGATAACTACATTGCAGGAAATAAGGATGAGATACTTCTTATGGACGCTGCAGGCACACCCCTCCTCACCATCCGCCGCAAGAGGCTAAGTCTGGGAGACACCTGGCTCATCTTTGAAGGAGAGGACTCTGTCAAACTCCTTTTTACAGCAAGAAAGCATGTCAACAACAAGTGTTTGGCACACCTCCTCCGCTCAGCAAATGAAGACGCTTCATGGAGGAGCAAAATTGGCAATAAGAAAAAGGAAATCGCATATGAGATTGAGGGCTCATACATGCAACGTTGCTGCACGTTTTATGACAATAATAGGAGAAAAGTTGCAGAGATCAAGAGGAAGGAAGCTGTGTCAGGAGGGGTAGCTTTTGGTGCAGACATCTTCCGTCTCATCGTACAGCCTCACATGGACCCCACTCTAGCCATGGCTTTTGTCATCCTCCTCGATCACATGTTCGGATCTCGTTCACTAATACGTCCTCATCCTCATCCTCATCACCATCACCTTTTCAACTTCTGTCATCATTTCCTCAACAATTTTATAGGTTAA 702 0.4601 MTKVYPNTADESVSIDGNRDAVAVVLTVWKKSLLLNCNGFTVLDGQGNLVFRVDNYIAGNKDEILLMDAAGTPLLTIRRKRLSLGDTWLIFEGEDSVKLLFTARKHVNNKCLAHLLRSANEDASWRSKIGNKKKEIAYEIEGSYMQRCCTFYDNNRRKVAEIKRKEAVSGGVAFGADIFRLIVQPHMDPTLAMAFVILLDHMFGSRSLIRPHPHPHHHHLFNFCHHFLNNFIG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0580 233 Pfam LURP-one-related 23 197 IPR007612 -
Apr10g0580 233 PANTHER - 1 204 IPR007612 -
Apr10g0580 233 Gene3D - 21 207 IPR038595 -
Apr10g0580 233 PANTHER PROTEIN LURP-ONE-RELATED 8 1 204 - -
Apr10g0580 233 SUPERFAMILY Tubby C-terminal domain-like 23 203 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0580 Apr-Chr10 12882942 12883814 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0580 - - aprc:113850590 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0580 10 12882942 12883814 Apr10g0580 10 12882942 12883814 ECH