Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0578 ATGAAAGTAGGATCTGGTAAAGGGAGAAAAGTGTGCCTGGCGGTGACAAGTGCTGTGATTGCAATTGTATTGCTAGTGGTGATACTAGCATTGACAGTGTTCAAAGCCAAGAATCCTGTTACCACAGTGAACTCAGTGACACTAGAAGATTTTCACATGAGTTTGGATATAGCAAAACTAAGGGTAGATTTGAATGTGACCCTGGACGTGGATGTCTCTGTGAAGAACCCTAATAAGGTGGGATTCAAGTACTCAGACAGCACTGCCCACCTCAATTACAGAGGGCAACTGATAGGCGAGGTCCCAATCCCCTCTGGGGAGATTTCTTCTGGCGAGACCAAAGGATTCAACCTCACCCTCACCATTATGGCTGACCGTTTGCTCTCCAATTCCCAGCTTTACTCAGATTTCACATCTGGTTCATTGCCCCTAAATACTTTCGTGAGGATTTCTGGCAAAGTCAGCATTTTAGGTTTTATCAAAGTCCATGTGGTTTCCTCCACATCTTGTGATTTTTCAGTTAATCTTTCCAATAGAACAATAGGGAACCAAGAGTGCCAATACAAGACAAAACTTTGA 579 0.4352 MKVGSGKGRKVCLAVTSAVIAIVLLVVILALTVFKAKNPVTTVNSVTLEDFHMSLDIAKLRVDLNVTLDVDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPSGEISSGETKGFNLTLTIMADRLLSNSQLYSDFTSGSLPLNTFVRISGKVSILGFIKVHVVSSTSCDFSVNLSNRTIGNQECQYKTKL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0578 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Apr10g0578 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Apr10g0578 192 Pfam Late embryogenesis abundant protein 72 169 IPR004864 -
Apr10g0578 192 SUPERFAMILY LEA14-like 36 164 - -
Apr10g0578 192 Gene3D - 26 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0578 Apr-Chr10 12868897 12871765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0578 - - gmx:100811806 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0578 10 12868897 12871765 Apr10g0578 10 12868897 12871765 ECH