Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0575 ATGAGAAGGTTGAGGTGGGTTCAGTCTTTATCACTTTCATTTACATTTACAGTTACATTTACATTTCATGGAATTGGATTTGTGGTGTGTGACAGAAAGCTGCAAAAAGCGGAAGGGCAAAGGAGGAGCCCACGAATATCGGCGTTGGAGGCTGAGGCTGAGGCTCACAGCCTTTCAATGAGTCGGCACTTGGATAACAGTGAGGGACCTGCATTCCGAACTAGGGGTAGAAAGAACACAAAACTCATGCCACTTCAACAACCAAACAAGGGTGTGAAACATTCTTCGCGTGAAGATATTCAAAAGAAAAGTGCCGATGATCGCCCATCAAAACTGCCATCTTCAACTTTTTTGCCAGAGAAACGAATACTTCAACTCGTCCTTGACACTTTGCAAAGGAGAGACACCTATGAAATATTTGCTGAACCAGTTGATCCAAATGAGGTTGAGGATTATTATTCAATCATTAAAGAGCCTATGGATTTTGGCACCATGCGGGCTAAACTACATGAGGGGATGTATACGAGTCTGGAACAATTTGAGGTTACAGCATTTATTTTATTTTATTTATATCATGATGTTTTTTTAATATTCGACAATGCGATGCATTTTAATTCTTCGGGTACCATATATTTCAGGCAGGCTCGTGTTATAAATGAACTAGCTAAGAAAGTTTTTGATCTATTAAAAAACAATATTGAGAAGTTTGAATTGGAATTCTCAGAAACAAGGCGAAAAGTAGGTCGGAGGAACCCAGGAGACTTTAGGGATTCAATAGACATGAATTCTTGTGAAATAGATACTGGTGTGCCCTCAAAAACTGTACCATGTTCTTCTCGTGGTACATCAAACCGGAAAAGCATTAGGGCAAATCATGGATGTCCTGACATTGCTAAGCATGTTGATGCTAGAGATGTTGAGATTCCTTCAGGTACTAAAGACAGTAGCAGATGCAGATCTTTTGAGGTTGATAGACGCTGTACTTATAGACCTTTGTCCCTGGACGAGGATAAGTCAATATTTTCCACGGTTTATGGTAAATTGAAACTTCTAGAGCAAGTCAATCAGCAAGATATTGGCTACAAAGATAGCTTGATGTTGTTTGTTAAAGATTTAGGAACCACTGCTAAAAATATAGCTAAAAGGAAATTACTAGGATGTGAAATTCGTACAGCATCTACTTCTGTTCCATGTACACCAAATACTTCTAATTATACAGTCACTGCCTCTGCCTTGATGTCTCAGTATCCCTTGAATCGGTTTCCCGATTATCCTAATGAAATGAGAAGCCCCATGGAAAAGATTGCGAGTAGAAGGGAAGGGGTTGAAGGGACATTGAATACTGAAAGAGAGAGCCGCTGTAATCCCTTAGAGGGTAATACTCAAGGAAGTCACGGGTGGCCTTTAGGGTGTGATAGAGAGTTTCCAAACCAGAGTTTCTGTTTTGATTCACACTGTTCACGAGCTTGTGCTGAAGATTTCAAAGAAACTGGCAAGAAGATGTTGTTGGACAAATCAAAGTTTGTCAATCAAGAACAGCTGACAGTGTCAATCCAAGAGAATTCTCAAACTAATTTGTTAGAATCAAAGATGGAAAGTAAATGCAAGTTTCAACCACGACCTTGGGCCATGGAAAGTAGTAATGTTTCATGTTTCGCTCAAGATAGAAGCCAGATGCACCAATCTAGTTCAAAGTGCGTATTGGGTGATCGATTAGCCCAGTGTCCAACAAAGGAGTTTAGTTGGTCATCTGAGTCCATGAAGATTTTAAAATCTGACCAGTGTGTGCCACTGGCTTCAAGTTTTGTTTTCAATCTTCCATATTTGAGGACACGGCTTGATCAGATAAACTCATCGGAGCAGTATGGGTTCTTACAACCTTAG 1884 0.4007 MRRLRWVQSLSLSFTFTVTFTFHGIGFVVCDRKLQKAEGQRRSPRISALEAEAEAHSLSMSRHLDNSEGPAFRTRGRKNTKLMPLQQPNKGVKHSSREDIQKKSADDRPSKLPSSTFLPEKRILQLVLDTLQRRDTYEIFAEPVDPNEVEDYYSIIKEPMDFGTMRAKLHEGMYTSLEQFEVTAFILFYLYHDVFLIFDNAMHFNSSGTIYFRQARVINELAKKVFDLLKNNIEKFELEFSETRRKVGRRNPGDFRDSIDMNSCEIDTGVPSKTVPCSSRGTSNRKSIRANHGCPDIAKHVDARDVEIPSGTKDSSRCRSFEVDRRCTYRPLSLDEDKSIFSTVYGKLKLLEQVNQQDIGYKDSLMLFVKDLGTTAKNIAKRKLLGCEIRTASTSVPCTPNTSNYTVTASALMSQYPLNRFPDYPNEMRSPMEKIASRREGVEGTLNTERESRCNPLEGNTQGSHGWPLGCDREFPNQSFCFDSHCSRACAEDFKETGKKMLLDKSKFVNQEQLTVSIQENSQTNLLESKMESKCKFQPRPWAMESSNVSCFAQDRSQMHQSSSKCVLGDRLAQCPTKEFSWSSESMKILKSDQCVPLASSFVFNLPYLRTRLDQINSSEQYGFLQP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0575 627 SUPERFAMILY Bromodomain 110 235 IPR036427 GO:0005515
Apr10g0575 627 Gene3D - 81 250 IPR036427 GO:0005515
Apr10g0575 627 ProSiteProfiles Bromodomain profile. 132 212 IPR001487 GO:0005515
Apr10g0575 627 PRINTS Bromodomain signature 135 148 IPR001487 GO:0005515
Apr10g0575 627 PRINTS Bromodomain signature 149 165 IPR001487 GO:0005515
Apr10g0575 627 PRINTS Bromodomain signature 165 183 IPR001487 GO:0005515
Apr10g0575 627 PRINTS Bromodomain signature 193 212 IPR001487 GO:0005515
Apr10g0575 627 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 34 622 - -
Apr10g0575 627 MobiDBLite consensus disorder prediction 92 109 - -
Apr10g0575 627 Coils Coil 219 246 - -
Apr10g0575 627 PANTHER BROMODOMAIN CONTAINING PROTEIN 34 622 - -
Apr10g0575 627 SMART bromo_6 113 231 IPR001487 GO:0005515
Apr10g0575 627 MobiDBLite consensus disorder prediction 57 115 - -
Apr10g0575 627 Pfam Bromodomain 127 216 IPR001487 GO:0005515
Apr10g0575 627 CDD Bromodomain 120 226 - -
Apr10g0575 627 MobiDBLite consensus disorder prediction 440 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0575 Apr-Chr10 12846427 12849380 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0575 K22184 - gmx:102667935 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0575 10 12846427 12849380 Apr10g0575 10 12846427 12849380 ECH