Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0564 ATGAAGCAATCAAAGGATCCTTTTGAAGCAGCATTTGAGGAATCGCCACCTGAATCCCCAGCCGAGACTGAGATAGAGGCACCAAACCCCAGTTCTGTTGTTGTGCTTCCACAACCCACTCAGGAAGAAGATGTTAATGTGAAGAAGGTGAGTACGGGCAAGAATAAAGAGGAGGAAGATGAGGAGGAGGAGGACAACATGGATGTTGAACTCGCCAAGTTTCCTTCTGCTGGTGACCCTCATAAAATGGCCAAGATGCAGGCTATTTTGTCACAATTCACTGAAGAACAGATGAGTAGATATGAGTCCTTTCGGAGGGCTGGATTTCAGAAAGCTAACATGAAAAGGTTATTAGCTAGCATCACTGGGACCCAGAAAATTTCTGTGCCAATGACGATTGTTGTATCAGGAATTGCTAAAATGTTTGTTGGTGAAGTTGTTGAAACAGCTAGAATAGTTATGAAAGAGAGGAAGGAATCTGGACCAATCCGACCTTGTCATCTGAGAGAAGCATATAGACGATTGAAGCTTGAAGGAAAAGTTTTTCAGAGATCAGCCTCAAGACTCTTCCGGTAG 576 0.4375 MKQSKDPFEAAFEESPPESPAETEIEAPNPSSVVVLPQPTQEEDVNVKKVSTGKNKEEEDEEEEDNMDVELAKFPSAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFQRSASRLFR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0564 191 MobiDBLite consensus disorder prediction 1 67 - -
Apr10g0564 191 PANTHER TAFII28-LIKE PROTEIN-RELATED 1 191 - -
Apr10g0564 191 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED 1 191 IPR045127 GO:0005669|GO:0006367|GO:0051123
Apr10g0564 191 SUPERFAMILY Histone-fold 93 181 IPR009072 GO:0046982
Apr10g0564 191 CDD TAF11 93 176 IPR006809 GO:0005634|GO:0006367
Apr10g0564 191 Pfam hTAFII28-like protein conserved region 89 174 IPR006809 GO:0005634|GO:0006367
Apr10g0564 191 Gene3D Histone, subunit A 93 182 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0564 K03135 - gmx:100305481 258.455