Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0554 ATGGACCCTAAACTATTACTTTCTTCACCTTCGTCATCTTCTACCCCGTTACCATTCTTCATCTCAAACACTCTCCCTTTCCATCAAAAACCGAACCTTTCTCTCAAACTTCAAAAATCCCAATTTTGGGGAACGAATTTGAGTTGGGTAGAATCACAATCACGTGCAAGAGTGGATGCGGTGGGGCCAATAAGAGCCGCAGTGAAGAGAAGGAAAGAGCTTCCCTTCGACAACGTGATACAGAGAGACAAGAAGCTGAAATTCGTGCTTAGGGTAAGGAAGATTCTAGTGAGTCAACAAGATAGGGTTATGTCTCTTAGGGAATTGGGTAAATTCAAAAGAGATTTGGGTCTTGATAGAAAGAGGCGTCTTATTGCTCTATTGAAGAAATTCCCTGCAGTTTTTGAGATTTTGGAAGAAGGGGTTTACTCTCTCAAATTCAAAATGACCCCTGAAGCTGAAAGGATTTATTTGGAGGAATTGAAGGTTAGGAATGAAATGGAGGAGTTAGTTGTTGTTAAGCTTAGGAAATTGTTGATGATGTCGCTAGAAAAGAGGATTTTGTTGGAGAAAATAGCGCATCTTAGGGCTGATTTGGGACTCCCACAAGAATTTCGTGACACCATTTGTCATAGGTACCCTCAGTACTTCAGAGTGGTTGCAACAGCACGGGGCCCTGCTCTTGAATTGACACATTGGGACCCCGAGCTTGCGGTTTCTGCAGCCGAGTTATCTGCTGAGGAGAATCGAATTAAGGAACTTGAAGAACAGAATTTGATCATAGACAGGCCTCTCAAGTTCAATAGGGTGAGGCTTCCTAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAAGATAATGCAATTTAGGGACTTGCCTTATATATCCCCTTATTCGGATTTCTCTGGACTGAGGCCAGGATCAAGGGAGAAAGAGAAGCATGCTTGTGGAGTTGTTCATGAGATTTTGAGTCTCACCATGGAGAAACGAACGCTTGTTGATCACTTCACGCATTTTCGAGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGTTGATAAGGCATCCTGATATGTTTTATGTCTCACTTAAAGGGGAGAGAGATTCTGTGTTTCTGAGGGAAGCTTATCGAGATTCTCAGTTGGTGGAGAAGGACCGTTTGTTACTCATAAAGGAAAAGCTTCGTGCTCTGGTTAATGTTCCTCGTTTTCCCAAGGGAGCTGCTCGCAGGATAGCCGAAGATAGCATGAAAGAAAATGATGGCAGAGAAGATGAAAGTGGTGAAGAGGAAGAAGGATGGTCAGAAGTTGATAATTTAGGGAGTGACGATGGATTTGATGACATTGATGACTATGATTGGAGCGATGAAGATGACGACGACGATACACCACCAGACTTTTTTGAGGATGCTGAGACGTTGGAGATTGGACAAGGAAAGACAACTAAACAAGTTGAGGACTCAAGACAGAATGATGGAAAGGTCCTTGTTCCTGTATTCCCTGATGGTCGCCCCAGAGAACGTTGGTGA 1530 0.4359 MDPKLLLSSPSSSSTPLPFFISNTLPFHQKPNLSLKLQKSQFWGTNLSWVESQSRARVDAVGPIRAAVKRRKELPFDNVIQRDKKLKFVLRVRKILVSQQDRVMSLRELGKFKRDLGLDRKRRLIALLKKFPAVFEILEEGVYSLKFKMTPEAERIYLEELKVRNEMEELVVVKLRKLLMMSLEKRILLEKIAHLRADLGLPQEFRDTICHRYPQYFRVVATARGPALELTHWDPELAVSAAELSAEENRIKELEEQNLIIDRPLKFNRVRLPKGLNLSKGEMRKIMQFRDLPYISPYSDFSGLRPGSREKEKHACGVVHEILSLTMEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGERDSVFLREAYRDSQLVEKDRLLLIKEKLRALVNVPRFPKGAARRIAEDSMKENDGREDESGEEEEGWSEVDNLGSDDGFDDIDDYDWSDEDDDDDTPPDFFEDAETLEIGQGKTTKQVEDSRQNDGKVLVPVFPDGRPRERW* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0554 509 Coils Coil 237 257 - -
Apr10g0554 509 MobiDBLite consensus disorder prediction 424 469 - -
Apr10g0554 509 Pfam Plant organelle RNA recognition domain 72 400 IPR021099 GO:0003723
Apr10g0554 509 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 14 459 IPR040293 GO:0000373|GO:0003723
Apr10g0554 509 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 14 459 IPR045040 GO:0003723
Apr10g0554 509 MobiDBLite consensus disorder prediction 410 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0554 Apr-Chr10 12678421 12680398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0554 - - gmx:100810556 757.673