Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0551 ATGAGCTTCGATTCCTTGCCCAGCATGGACAACTTTTCCTCCAAAGCTTCAAACCAGATTCGGTTTCTGCTCAGCTCCTTCAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTTTCTCAGTTCGCTGAATTTGGAACCGCTGGATGCATTTTGCTGCTTCAGACTTGCTTGGATCACTATAGTTATGTCAGAAGAGATACAAAAGACATGCAGCATGAGCCAATTCTTGAGGCAGTCATTAAGTACCTCTTGGACAAACCAAACTTCATTACAGTGTTTTTGGAGACAATGAAGAATGTAGAAATTAATGAAAGCTTTTTAGAAAGTTTTTGTAATGGATTGCAGTTGTCATTATTGGAAAAAATTGTGATCAGTCTTGCTTTATCTGATTCTGAAAATCCTGATGCTAGGCTATGTGGGAAGAATTTTTGCATGGCTCGGATTGAGGAATTGTGTGCCAATCCTGGTTCTTTGAGTTTCCATGAGCAAATTCACAATATTATCATGTTTCTAAAGCAGTCTGAGGGTCTATCGAAGCATGTGGATTCCTTTATGCAGATATTATCACTTGTGCAGTTTAAGGACACACCACCTTTTGTTTTGACTCCATTGCTACCTGATGAGATGCGCGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCATGAGTGTGGTGAAAATGATTTCGATGCTATTTTAGCTGACATACAGAAGGAAATGGACATGGGAGATATTGTGAAGGAACTAGGCTATGGGTGCACTATTGATGTCGCACAGTGCAAGGAAATATTTTCACTCTTTTTACCTTTAACTGATAGTATGCTCTCTAAATTACTTGGTGCTATTGCTGGTACCCATGCTGGGCTGGAGGACAACCAGAATACATTCTTAACTTTTGGCACAGCCCTTGGATGCAACAACTTGTCTGAGTTGCCACCACTGAACTCTTGGAATATTGATGTCTTGATAGATACAGTCAAGCATCTTGCGCCTCAAACCAATTGGATACGGGTTATTGAAAATCTTGATCATGAAGGATTTTTCCTTCCTAGTGAAGAAGCTTTCTCTTTTCTCATGTCTGTATATAAACTTGCCTGTAAGGATCCATTCCCTCTCCATGCTGTCTGTGGGTCTGTCTGGAAGAATACTGAGGGTCAGCTGTCTTTCCTTAAATACGCTGTGTCAGCACCACCGGAAATTTTTACCTTTACACACTCTGCTAGGCAGCTGGCATATGTTGATGCAATCAATGGCCACAAGCTTCAAAATGGACATGCAAATCATGCATGGCTGTGTCTTGACCTTTTGGATGTCCTCTGCCAGCTAGCTGAAAAGGGTTATGCCAGTATTGTTCGATCAATCCTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTGCTTCTTGGGATGGCACAAGTTAATACTGCCTACAACCTCTTGCAGCGTGAAGTATCTCTAATTGTTTTTCCCATGGTAGTAAAAAGTGCCGTTGGCAGTGGGATGATTTTACACCTCTGGCATTTGAATCCCAATATGGTCTTGCGAGGGTTTATGGATTCTCAAAATAATGATGCAGACAGCACTATAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTCTGTCATCAGTGGTGGAAATTGTTCCCTCTTACTATAGTGTAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTTCTTGACCTTGATAAGTGGTTGAGTAGCAACTTAACTACTTACAAGGATGTCTTTTTTGAGGAATGCCTCAAGTTCTTAAAGGATGTCCAGTTTGGTGGATCACAAAACCTTTCTGGCAAATCTTTTCATCAGTCTGGTGCTGTTCAGAATATCTATGCTGAGACATCTGCTACTTTCTTGAAGGTTCTTAAATCTCATACTGACTTGGTAATCGCAAGGCAACTTTCTGAGGAGTTGGAGAAGTTGCATATATCTATTGTAGATTCAAATCCAAGGCTTCAGAATGGTGGGACTGCTGATTCATCTACTTCTGATGGATATGCCGATGACATTGAAGCAGAAGCAAACTCCTACTTCCATCAGATGTTCTCTGATCAGTTAACCATTAACGCAATGGTGCAAATGCTTGCCCGATTCAAGGAATCTTCTGTGAAGAGGGAGAAGTCAATTTTTGAATGCATGATTGCAAACTTATTTGAGGAATATAGGTTTTTCCCAAAGTATCCTGAAAGGCAACTCAAAATTGCTGCAGTTCTCTTTGGTTCTGTGATCAAGCATCAGCTTGTAACTCATCTTTCTCTTGGGATTGCTCTTCGATATGTTCTTGATGCACTGCGCAAGCCTGCAGATTCAAAAATGTTTTTGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTGATTGAGTGGCCTCAGTATTGCAATCACATTCTACAAATTTCCCATTTGCGCAGTACACATTCAGAAATAGTTGCTTTCATTGAACAAGCTCTTGCCAGGATTTCCTCTGGTCATGCAGATGTAGATGGGGCAAGCCATCCTGCTGTTATTAGTAACCATAATTCTGCTCAGGCTACATTAGGGCATGTAGAGGTAAAACAGCTCAGTGGCTCTAGCGTCCTACAACCTGGACAACAACATTTATCGCTGCAGCTTCAACAGAGACGTGAAAATCCCTTGGATGATCGTCACAAAGCCACTGTTAGTTCATCTACTGATGTAAAACCACTCTTATCTTCCCTAGGGCAATCTTCAGTAGTAACACCTGCTGATACTTCTAGTTCTAGTAAGTTACATAGCACAGTTAGTGCCTCATCAATGCTATCTTCCCCTGGTTTTGTTCGTCCATCCCGTGGAGCTAATTCTACCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCTGCTGAGAAAAGAGAAACTCCTATTGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATCATTTATAATTAATAATATTTCTGCTGCTAATATTGAGGCTAAAGCAAAAGAATTCACTGAAATTTTGAAAGAGCAGTACTATCCATGGTTTGCACAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCAAATTTCCATGACTTGTATCTGAAATTCCTGGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTCCAGGCAACTTATGAAAATTGCAAGGTTCTTTTGGGATCAGAACTCATAAAATCTAGTTCAGAGGAGCGGTCTTTGCTAAAAAATCTGGGGAGCTGGCTTGGAAAGTTGACAATTGGCCGGAACCAGGTTTTGAGGGCTCGTGAAATAGACCCAAAATCTTTGATTATAGAGGCATATGAGAAGGGGCTGATGATTGCAGTTATTCCATTTACTTCAAAGATCCTCGAACCATGCCAAAGCAGTCTTGCATATCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAACCTTGGTGTAGATATGAAGGATGTCACACCTACTTCTCTCCTTAAGGATCGTAAAAGAGAAATTGAAGGAAATCCTGATTTCTCCAATAAAGATGTTGGGGCATCTCAATCACAAATGATTTCTGATATAAAATCTGGCCTTGTACCTCCAGTAAATCAAGTCGAATTACCGCTTGAAGTCACCAATCCATCCAATACTGCGGCTCATCCACATATACTGTCTCAGTATGCTGGTCCTCTTCATATTTCAACGGGGACATTGATGGAAGATGAGAAGGTTACACCTTTGGGATTGTCTGATCAGCTTCCCTCTGCTCAAGGACTGTTACAAGCAACTCCTTCCCCAGCACCGTTTACTATTAGCCAGCTCCCAACACAGATACCTAACATTGGAACTCATGTTATTATCAATCAAAAACTCAGTGGTTTTGGTTTGCAAATGCATTTTCAGAGAGCAGTACCCATTGCAATGGACAGAGCTATCAAAGAGATAGTGTCTAGTATTGTGCAGCGTAGTGTTTCCATAGCAACACAAACTACAAAGGAGCTTGTTTTAAAGGATTATGCAATGGAATCTGACGAGACACGAATATTAAATGCTGCACACTTGATGGTTGCCAGCCTGGCTGGGAGTTTGGCTCATGTTACATGCAAAGAACCATTACGGGCCTCAATATCTAGTCAACTGAGGACTTCACTTCAGAACTTAAATATTGCTAGTGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTAGATCTAGGGTGTGCAGTGATTGAACAGGCTGCTACTGATAAGGCAATAAACACCATTGATACCGAAATTGGTCAGCAACTTTCTTTGAGAAGGAAACATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAACTTGTATCCACAAGGTTCTATGGGTGGTGTACCAGAGCCCCTTCGCCCCAAACCTGGTCAGTTGTCCCTCTCACAACAGCGTGTCTATGAGGACTTTGTTCGACTTCCCTGGCAAAACCAGTCTAGCCAAAGCTCACATTCTATGTCTGCTGGTGTTGCTGTTCAATCTGGAAATACTAGTCTTACTGGCGCCAATGGTCCTGTATCAGGGCAGATAAACCCTGGTTACCCTGTGAGCACAGCATATGAAGGGGTCTCACGACCGTTAGATGATATAACAGAATCAAATTTGGCTCCACATTTTAGTGCTTCCTCAATTCACATTAGAGCTGCTGATAGTGTTTCCCAGCATAGTTTGGAGAAGGACTCTCTTGCCTCATTTCCTTCAGCTTCTTCCACCCCAGAGTTGCATGCAGTAGATTCTTCAGATGTTGTGAAAGAATCTGGAGCTTCTTCACAGCCACTAGTTACATCAGGTGCTATGGAGCGCCTTGGAAGTAGTTTCTTGGAGCCTTCTCTCACTACAAGAGATGCCCTAGATAAATTTCAAATTGTTGCACAAAAGTTGGAAGCTATGGTCAGCAATGATTCCAGGGAAGCAGAAATACAGGGTGTCATTTCTGAGGTTCCTGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCTCAAAAGGTTTTTAAGGGTTTATATGATAATGCATCAAACAACATTCATGTATGTGCTCATCTTGCAATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTTACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATATAACAAAGATATTACTGTTGGCCTCATCCGTAGCGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCAAAACTAATTGATGGAGGAAGGAACAAGGCTGCAACGGAGTTTTCTATTTCCCTTCTTCAAACCCTGGTTATTGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATGCCCTGAGTCATTACCACAGCTTCTTGAAATGATCAAGAATCCTACTGGTAATGCTGCTGCTCTATCCTCTGGTAATGCTGGAAAGGAGGATAAGGCTAGACAATCAAGAGACAATAAGGGTCCTGGTCTTCTAGCTGCAAACAGGGAAGAGTTAAATGGTTTAGATTCTGTTGAACCAGATCCTGCTGGGTTCCGGGAGCAGGTTTCCATGTTGTTTGCTGAATGGTATAGGATATGTGAACTTCCTGGTGCCAATGATTCAGCTTCTTCCCACTTCATCTTGCAATTGCATCAGAATGGACTTCTCAAGGGGGATGATGTTACAGATCGTTTTTTCCGGCTATTGATGGAACTAGCTGTTACACATTGCTTATCCTCTGAGGTGATTAGTTCGGGGGCATTGACATCTCCTCAACAGATGCCGACAATGTCATTTCTTGCAATTGATATTTATGCAAAGCTTATCTTCTCAATCTTGAAGGGATCAAACAAACTCTTGCTTCTTTCTAAGATTCTGGGAGTTACTGTCAGACTCATTATAAAGGATGCAGAGGAGAAGAAGGCCTCTTTTAATGGAAGACCATTTTTCAGATTGTTTATCAACTGGCTTCTAGATCTTAGTTCGTTGGAGCCTGTTACTGATGGTTCAAATCTCCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCTTTGCAGCCCCTCAAAGTTCCTGCATTCAGTTTTGCATGGCTTGAGTTGATTAGTCACCGGAGCTTCATGCCAAAAATGTTGACTGGCAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATCTTTTCCAATTTATGGAACCTTTTCTAAGGCATGCTGAACTTGGAGACCCCGTTCGCGTTCTCTACAAAGGCACGCTTAGGGTGCTCTTGGTGCTACTTCACGACTTTCCAGAGTTTCTATGTGACTATCACTTTACCTTTTGCGATGTTATTCCTCCAAGTTGCATACAAATGCGAAATATAATTCTTAGTGCATTTCCGCGTAGTATGAGGCTGCCAGATCCATCTACTCCAAATTTGAAGATTGATTTGCTTCAAGAAATAACCCAATCACCTCGCATTCTTTCTGAGGTTGATGCAGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGACTACCTCAAGACAAGGCAACAGAGTTCTTCATTTTTGTCTGAACTGAAGGAGAAGCTGCTTCTCTCACCTAATGAAGCTGCCTCTGCTGGGACTCGTTACAATGTGCCACTAATCAACTCACTGGTGTTATATGTTGGAATGCAGGCAATCCAGCAGCTCCAAGGTCGAACACCTCATGCACAATCAGCAGCAAATGCTTTCCCATTGGCCGTATTTTCTGTCGGTGCTGCATTGGATATATTCCAGACACTAATTGTGGACTTGGACACTGAAGGGCGGTACCTTTTCCTCAATGCCGTTGCCAACCAACTTCGTTATCCCAATACTCATACACACTACTTCTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATTACTAGAGTCTTGTTAGAACGCCTAATTGTGAATCGTCCTCATCCCTGGGGCCTCCTCATTACTTTTATTGAGCTCATCAAGAATCCAAGGTACAATTTCTGGAACCGGTCGTTCATAAGATGTGCGCCAGAGATCGAAAAACTCTTTGAATCAGTGTCTAGATCTTGTGGAGGTCCAAAACCTGTGGATGACAGTATGGTTTCGGGTTGGGTCTGA 7245 0.4179 MSFDSLPSMDNFSSKASNQIRFLLSSFNEVNFDSVFHQLSQFAEFGTAGCILLLQTCLDHYSYVRRDTKDMQHEPILEAVIKYLLDKPNFITVFLETMKNVEINESFLESFCNGLQLSLLEKIVISLALSDSENPDARLCGKNFCMARIEELCANPGSLSFHEQIHNIIMFLKQSEGLSKHVDSFMQILSLVQFKDTPPFVLTPLLPDEMREADFLRNMELFHECGENDFDAILADIQKEMDMGDIVKELGYGCTIDVAQCKEIFSLFLPLTDSMLSKLLGAIAGTHAGLEDNQNTFLTFGTALGCNNLSELPPLNSWNIDVLIDTVKHLAPQTNWIRVIENLDHEGFFLPSEEAFSFLMSVYKLACKDPFPLHAVCGSVWKNTEGQLSFLKYAVSAPPEIFTFTHSARQLAYVDAINGHKLQNGHANHAWLCLDLLDVLCQLAEKGYASIVRSILDYPLKHCPEVLLLGMAQVNTAYNLLQREVSLIVFPMVVKSAVGSGMILHLWHLNPNMVLRGFMDSQNNDADSTIRIVDICQELKILSSVVEIVPSYYSVRLAAVASRKEFLDLDKWLSSNLTTYKDVFFEECLKFLKDVQFGGSQNLSGKSFHQSGAVQNIYAETSATFLKVLKSHTDLVIARQLSEELEKLHISIVDSNPRLQNGGTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHADVDGASHPAVISNHNSAQATLGHVEVKQLSGSSVLQPGQQHLSLQLQQRRENPLDDRHKATVSSSTDVKPLLSSLGQSSVVTPADTSSSSKLHSTVSASSMLSSPGFVRPSRGANSTRFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQSQMISDIKSGLVPPVNQVELPLEVTNPSNTAAHPHILSQYAGPLHISTGTLMEDEKVTPLGLSDQLPSAQGLLQATPSPAPFTISQLPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISSQLRTSLQNLNIASEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAVQSGNTSLTGANGPVSGQINPGYPVSTAYEGVSRPLDDITESNLAPHFSASSIHIRAADSVSQHSLEKDSLASFPSASSTPELHAVDSSDVVKESGASSQPLVTSGAMERLGSSFLEPSLTTRDALDKFQIVAQKLEAMVSNDSREAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNNIHVCAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKLATKPGCPESLPQLLEMIKNPTGNAAALSSGNAGKEDKARQSRDNKGPGLLAANREELNGLDSVEPDPAGFREQVSMLFAEWYRICELPGANDSASSHFILQLHQNGLLKGDDVTDRFFRLLMELAVTHCLSSEVISSGALTSPQQMPTMSFLAIDIYAKLIFSILKGSNKLLLLSKILGVTVRLIIKDAEEKKASFNGRPFFRLFINWLLDLSSLEPVTDGSNLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDDYLKTRQQSSSFLSELKEKLLLSPNEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDSMVSGWV* 2415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0551 2414 PANTHER BNACNNG58980D PROTEIN 13 2413 - -
Apr10g0551 2414 Pfam CCR4-Not complex component, Not1 2025 2395 IPR007196 -
Apr10g0551 2414 Gene3D - 2169 2400 - -
Apr10g0551 2414 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 658 827 IPR032193 -
Apr10g0551 2414 Gene3D - 663 830 IPR038535 -
Apr10g0551 2414 MobiDBLite consensus disorder prediction 880 901 - -
Apr10g0551 2414 MobiDBLite consensus disorder prediction 1840 1867 - -
Apr10g0551 2414 MobiDBLite consensus disorder prediction 1596 1627 - -
Apr10g0551 2414 Gene3D - 944 1194 - -
Apr10g0551 2414 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 13 2413 IPR040398 GO:0017148|GO:0030015
Apr10g0551 2414 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1318 1460 IPR024557 -
Apr10g0551 2414 Gene3D - 1876 2168 - -
Apr10g0551 2414 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 972 1192 IPR032191 -
Apr10g0551 2414 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 488 630 IPR032194 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0551 K12604 - gmx:100783935 4274.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0551 10 12640583 12662229 Apr10g0551 10 12640583 12662229 ECH