Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0530 ATGGAGGCAGCAAGAACTCACATAGCCCTTGTTTCCATCCCTGCTTTCAGCCACCAAGTTTCAATCCTTGAATTCGCCAAGCGTCTCATCAATCTCCACCAAGAACACACCTTCCATTTCACATGCATCATTCCCACCTTTGGTTCACCCACCAATGCTTCAAAACCCTTCTTTGATTCCCTCCCTCCAACCATTCACTACATTTTCCTCCCCCCAGTGGACTGTGAGGACCTACAAGTTAATGGGGTTCCCATAGAAATCCAAATTCAGCTTTCAGTTTCTCGATCCATGCCTTTGGTGCGTGAAGCATTGACATCACTCATCAATAGTAGCGGTTCCTCCAAAGTGGTTGCTCTTATTGCTGATGGCATGGCAATTGAAGCACTAGAGTTTGGTAAGGAATTTAACATCTTGTCCTACATATACTTCCCTTGTTCAATCATGTTGTTATCACTATGCCTACACTCTTCAGAATTGGATGAAAAAGTTTCTTGTGAGTATAGAGATCATCCCAAATTAATAGAGATTCCGGGTTGTATTCCTGTTCATGGCAAAGATCTTCCAAATAGTGTTCAAGAAAGGTCTAGTTTGAAGTACAAATTGTTTCTTAAACGTGGCCAAAAATACCGTTGTGTTGATGGTTTGTTAGTAAATAGTTTCATGGAATTGGAACCTGATGCAACAAGGGCAATATCACAAGAAAGTAGATGTAATCCTCCTGTATATCCAATTGGGCCCATTACGCAAAGTGGGCCTAGTGATCCAAAAAATGGTTGGGAGTGTTTACTATGGTTGGATAAGCAGCCACCTAACTCGGTCCTTTATGTGTCATTTGGAAGTGGTGGCACACTCTCACAAGACCAAATCAATGAGCTTGCTTTGGGGTTGGAATTGAGTAAGCGTAAGTTTTTATGGGTTAATTTGAGAGCACCAAATGATAGAGCCAGTGCTACTTATTTCAATGGTGAGGGGGTGGAGGATCCTTTGCACTTTTTACCATTGGGATTCTTAGAGAGAACAAAAGGGAAGGGTTTGGTCATGTCTGGTTGGGCTCCTCAAATTGAAGTCCTTGGTCACAAGTCAATTGGTGCATTTCTAAGTCATTGTGGTTGGAATTCGGTTGTGGAGAGCGTTGTTCAAGGTGTGCCAATGATTGCTTGGCCGCTATTTGCTGAACAAAGAACCAATGCGGCTTTGGTAACTGATGGCTTAAAAGTTGCTTTGAGACCAAAAGCTAATTCTAGTGGCAATGGTTTGGTGGTGAAAGAGGAAATTTCTAATCTCATAAAGCGTCTTATGGAGGGGTTAGAGCGTGAAGAAATTCGTGGGAGAATGAAAGAACTACAAAAGTTGGCTGCTTGTGCTATGATGAAAGATGGGTCTTCCACATGCACAATATCAAAGTTGGCATTCAAGTGGAAAAGTTTGGGAAGATCCTTGGAAGATTGA 1449 0.4224 MEAARTHIALVSIPAFSHQVSILEFAKRLINLHQEHTFHFTCIIPTFGSPTNASKPFFDSLPPTIHYIFLPPVDCEDLQVNGVPIEIQIQLSVSRSMPLVREALTSLINSSGSSKVVALIADGMAIEALEFGKEFNILSYIYFPCSIMLLSLCLHSSELDEKVSCEYRDHPKLIEIPGCIPVHGKDLPNSVQERSSLKYKLFLKRGQKYRCVDGLLVNSFMELEPDATRAISQESRCNPPVYPIGPITQSGPSDPKNGWECLLWLDKQPPNSVLYVSFGSGGTLSQDQINELALGLELSKRKFLWVNLRAPNDRASATYFNGEGVEDPLHFLPLGFLERTKGKGLVMSGWAPQIEVLGHKSIGAFLSHCGWNSVVESVVQGVPMIAWPLFAEQRTNAALVTDGLKVALRPKANSSGNGLVVKEEISNLIKRLMEGLEREEIRGRMKELQKLAACAMMKDGSSTCTISKLAFKWKSLGRSLED* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0530 482 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Apr10g0530 482 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 5 477 - -
Apr10g0530 482 Gene3D Glycogen Phosphorylase B; 253 457 - -
Apr10g0530 482 Coils Coil 422 442 - -
Apr10g0530 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 260 410 IPR002213 GO:0008194
Apr10g0530 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 470 - -
Apr10g0530 482 CDD GT1_Gtf-like 7 455 IPR002213 GO:0008194
Apr10g0530 482 Gene3D Glycogen Phosphorylase B; 7 462 - -
Apr10g0530 482 PANTHER GLYCOSYLTRANSFERASE 5 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0530 Apr-Chr10 12312119 12313676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0530 7 481 Glycosyltransferase AT1G01420 42.767 3.34e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0530 K08237 - gmx:100775351 722.235