Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0524 ATGGAGCCCCTCACTCACATAGCCATAGTTTCAGTCCCAGTATATAGCCATTTACGCTCAATTCTTGAGTTCTCCAAGCGACTAGTTCATCTCCACCAAGACATTCATGTCACATGCATCAACCCCACATTTGGTTCACCTTGCAACAACACCAAAGCCCTTTTTGATTCCCTTCCCTCAACCATAGACTCCATGTTCCTACCACCAATAAAGTTGGAGGATCTTCCACTTGACATTCACCCAGCAATCCAAGTTCAAATGACTATCTCTCGTTCCCTACCTCTAATCCATGATGCATTGAAGAAACTACATTCTAGATCTAAGCTTGTTGGAGTAATTGCTGATGGATTAATAACAGAAGTGTTACCATTTGGCAAAGAACTCAATATACTGTCCTTCACATATTTCCCATCCACAGCTATGTTACTAGCATTGTGCTTGTATTCTTCTATGCTAGACAAGAAAATTTCTTGTGAGTACAAAGACCTATTAGAACCTGTTGAGATTCCCGGTTGCATACCAATTCTGGGGATTGATCTCCCAGACCCACTTCAAAATCGATCTGGTGAAGCATACAAGCAGTTTCTTGAAGCTAATGAAAGGTTCTATTTAGCTGATGGTATATTGGTTAACAACTTTTATGAAATGGAAGCAGAGACCATAAGAGCCTTGCAGCAAGAAGAAGGTAAAGGAATCCCTTCTGTTCTTGCAATTGGACCTTTCGTACAAAAGGGGTCATGTGATCAAGGAAGTGAGATTGAATATTTGAGATGGTTGGACAAGCAGCAACAAAATTCTGTGCTCTATGTTTCCTTTGGAAGTGGTGGGACACTCTCTCATGATCAAATAAATGAGCTTGCTTGGGGTTTGGAATTGAGTGGTAAAAACTTTTTATGGGTGTTAAGACCACCTAATAAGTTTGGCATTATTGCTGACATTGGTGTTGAAAATGAGGACCCTTTTGAGTTTTTACCAAATGGGTTTTTGAAGAGAACACAAGGGCATGGTTTGGTAGTTCCTTATTGGGCTTCGCAAGTTCAAATCCTTGGTCATGGTGCAATTGGTGGGTTCCTATGCCATTGCGGTTGGAATTCCACACTAGAAAGTGTTGTGAATGGTATTCCACTAATAGCATGGCCACTCTTTGCTGAGCAAAAGATGAATGCAGTTTTGCTAACCAATGGTTTGAAAGTGGCTATTAGGCCTAAACTTAACGAGAAGGGTATAGTGGAAAGGGAAGAGATAGCTGAGGTCATAAAGAATCTAATGGTAGGAGAAGAAGGTAAGGAAATTCGCCAAAGAATGAAAAAATTGAAAAGTGCTGCTAATGATGCGTTGAAGGAAGATGGATCTTCAACAAGGACTTTAACACAGTTAGCGCTAAAACTCCTGCACAAGTGA 1401 0.4069 MEPLTHIAIVSVPVYSHLRSILEFSKRLVHLHQDIHVTCINPTFGSPCNNTKALFDSLPSTIDSMFLPPIKLEDLPLDIHPAIQVQMTISRSLPLIHDALKKLHSRSKLVGVIADGLITEVLPFGKELNILSFTYFPSTAMLLALCLYSSMLDKKISCEYKDLLEPVEIPGCIPILGIDLPDPLQNRSGEAYKQFLEANERFYLADGILVNNFYEMEAETIRALQQEEGKGIPSVLAIGPFVQKGSCDQGSEIEYLRWLDKQQQNSVLYVSFGSGGTLSHDQINELAWGLELSGKNFLWVLRPPNKFGIIADIGVENEDPFEFLPNGFLKRTQGHGLVVPYWASQVQILGHGAIGGFLCHCGWNSTLESVVNGIPLIAWPLFAEQKMNAVLLTNGLKVAIRPKLNEKGIVEREEIAEVIKNLMVGEEGKEIRQRMKKLKSAANDALKEDGSSTRTLTQLALKLLHK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0524 466 CDD GT1_Gtf-like 6 442 IPR002213 GO:0008194
Apr10g0524 466 Gene3D Glycogen Phosphorylase B; 251 447 - -
Apr10g0524 466 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 262 395 IPR002213 GO:0008194
Apr10g0524 466 Coils Coil 428 448 - -
Apr10g0524 466 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Apr10g0524 466 Gene3D Glycogen Phosphorylase B; 6 452 - -
Apr10g0524 466 PANTHER TRANSFERASE, PUTATIVE-RELATED 1 461 - -
Apr10g0524 466 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 459 - -
Apr10g0524 466 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0524 Apr-Chr10 12254044 12255444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0524 6 462 Glycosyltransferase AT1G01420 45.770 1.32e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0524 K08237 - gmx:100819727 785.023