Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0521 ATGGAAATTGACAAGATTTTCAACACCGGTTTGCTCATTGTGGCTACCATTTTGGTGGCCAAACTTATCTCATCGTTCATAGTGCCCAAATCAAGAAAGAGACTTCCCCCGGTGATGAAGGGGTGGCCCCTCGTTGGAGCCCTTCCCCGTTTCCTCAAAGGTCCAATTTTTATGCTCCGCGAAGAGTACCCAAAACTTGGAAGCGTCTTCACCTTGAAGTTCTTTCACAAAAACATCACTTTCTTGATTGGCCCTGAGGTTTCTTCACACTTCTTCAAGGCCCCAGAGAATGAACTCAGCCAGCAAGAGGTGTATCGGTTCAATGTGCCAACTTTTGGACCTGGGGTGGTCTTTGACGTTGATTACTCTGTGAGGCAAGAGCAGTTCAGGTTTTTCACTGAGGCTCTTAGGGTCAACAAGCTCAAGAGTTATGTCAATCAGATGGTTGCAGAAGCTGAGTACTATTTCTCAAAGTGGGGACCAAGTGGGGAGATTGATTTGAAGTATGAGCTTGAGCATCTGATCATCTTGACAGCCAGTAGATGCCTTTTGGGCCGTGAAGTTCGTGACAAGCTCTTTGATGATGTCTCTGCATTGTTCCATGACCTTGATAATGGGATGCTTCCAATCAGTGTCATCTTACCATACCTGCCAATCCCAGCTCACAAGCGCCGTGACCAAGCACGCGCAAAGCTTGCTGAGATCTTTGCAAACATCATAGCATCTCGCAAGAGTGCCAACAAATCAGAAGATGACATGCTGCAGTGCTTCATTGACTCAAAATACAAAGATGGTCGCCCAACAACCGAATCTGAAGTGACTGGACTGCTCATTGCTGCGCTTTTCGCAGGTCAACACACAAGTTCCATTACCTCCACTTGGACTGGTGCATACCTCCTGTGTAACAACAAGTACCTTTCAGCCGTGTTGGAGGAGCAGAAGATGTTGATGGAAAAGCACGGGGACAGAGTTGATCATGATGTTTTGGCTGAAATGGATGTGCTGTATAGGTGCATTAAAGAAGCCTTGAGACTCCACCCCCCTCTGATTATGCTGATGAGAAGCTCACACACTGATTTTAGCGTCACAACAAGAGAGGGGAAAGCATATGACATTCCCAAGGGTCATATAATTGCGACATCACCTGCGTTTGCTAACAGGCTAAGTCACGTTTTCAAGGACCCTGATAGGTTTGATCCTGATCGATTTGCTGTTGGCAGGGAAGAAGACAAGGTGGCAGGTGCATTCTCAGTCATTTCATTTGGAGGAGGCCGACATGGATGCCTCGGTGAACCCTTCGCATATCTGCAGATAAAAGCAATATGGACTCATCTGCTGAGGAATTTTGAACTGGAGTTGGTGTCACCTTTTCCTGAGATCGATTGGAATGCCATGGTTGTAGGAGTGAAAGGAAAAGTGATGGTCCGATATAAGCGGAAGGAGCTTTCTCTTAATCAATAG 1461 0.4648 MEIDKIFNTGLLIVATILVAKLISSFIVPKSRKRLPPVMKGWPLVGALPRFLKGPIFMLREEYPKLGSVFTLKFFHKNITFLIGPEVSSHFFKAPENELSQQEVYRFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVNQMVAEAEYYFSKWGPSGEIDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVILPYLPIPAHKRRDQARAKLAEIFANIIASRKSANKSEDDMLQCFIDSKYKDGRPTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLCNNKYLSAVLEEQKMLMEKHGDRVDHDVLAEMDVLYRCIKEALRLHPPLIMLMRSSHTDFSVTTREGKAYDIPKGHIIATSPAFANRLSHVFKDPDRFDPDRFAVGREEDKVAGAFSVISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRKELSLNQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0521 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Apr10g0521 486 Pfam Cytochrome P450 36 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PANTHER CYTOCHROME P450 26 8 479 - -
Apr10g0521 486 Gene3D Cytochrome P450 31 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 57 80 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 274 300 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 332 348 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 412 428 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS E-class P450 group IV signature 428 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0521 486 PANTHER STEROL 14-DEMETHYLASE 8 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0521 Apr-Chr10 12237660 12240387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0521 1 483 Miscellaneous Gene Families AT1G11680 80.123 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0521 K05917 - gmx:100810799 884.019