Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0517 ATGGCTTCTTCTGCTACTAGTTATAGTGCTGTTCCTGAAGAACCTCAGATTCATCACATAATTGTCATTCCTGAAAAGATTGAGGCGGAGCTGCATGATGGGTGCTGTATTTACAAGGTTCCTCCCAATCTCAGGAAGTTGAAGGATGGGGAAGCCTACACACCAGAGTTGATCTCAATAGGCCCTTTTCACCACAACAAACCAGAGCTAAAGCCAATGCATAAACAGAAGCAAAGGTACTTTCTTGCCTTCTGGGAACGTGTAACAAACAAAAAGGCTTTGGCCAAATACAAAGCCTTCCTCAATGAAAACATTGGAATGATAAGAAGTAGTTATTCAGAGCCAGATAAACTTGATGATGATAAGTTTGTGGAAATGATTCTCTTAGACTCTATCTTCATTTTGGAGTTGTTTCTTAGAAAATCAGAACAATCTGCGCAAGAAAAGGATTATATGTTGACCACATCATGGATTTGCAAGAGCATCCAGAGAGACTTGTTACTTCTTGAAAATCAGCTTCCAATCTTTGTCTTGGAAGAATTATATAAAAGGGTATATAAGCTAAATAGTCTTAGTTTTCTTGAGCTTGCATTTAACTACTTTGAAGATTATTACCCACATAAGTCAACAAGTGACCAAAATAATGATATGGTCAAGAACTTCAAATCATGCAAGCACTTCACAGATTTGATCAGATTTTTCTTCCTTCCAGAAAAGGTTCACGCTAAAGAGTGGAATCCATCAGAACATTTCACCCTTAATGGCAAACATGAATGTGTGCTTAAGACTGCTACTAAGTTGAATGAAGCTGGAGTTAGCTTTGAGAAAGTTCACCACAGGAACTTATTAGACATAAAGTTTAAGAAGATTCCAGTTTTGAGTTGGTTTCTATGCTTAGGTTGTTTACCATGCTCCAAATGGGTCAAAGCTCGTTTTCAAATCCCTCAATTAGAAGTGCTTCAAACAACAGAATGTGTCTTAAGGAACCTTATTGCATTTGAGCAGTGCCACTATTCAGACCAACCCTTTATGTGCAACTATGTTTCTCTAATTGACTCTCTTATTAACACTAAAGAGGATGTGGAGTTGTTGGTTGACAAAGAAATCATAGTCCATGAACTTGGCTGCCATAAGGAATTGGCAACTATGATAAATGGTCTTTGCAAGAATGTTGTGGTGAATTGCAATTATTATGGCAAAATCTCAAGGAAAATCAATGATCACTACAATAGCTGTTGGAAGCATTATATGGGTATGTTAAGGTCAGTTTACTTCCGTGATCCTTGGAGACTCAGCTCAACTATTGTAGGAGTTGTTATCTTCTTATTTGCCATTGTTAACTTTCTTCGTGTCACTGGTTTATACCATCCAAAATACTGA 1380 0.3746 MASSATSYSAVPEEPQIHHIIVIPEKIEAELHDGCCIYKVPPNLRKLKDGEAYTPELISIGPFHHNKPELKPMHKQKQRYFLAFWERVTNKKALAKYKAFLNENIGMIRSSYSEPDKLDDDKFVEMILLDSIFILELFLRKSEQSAQEKDYMLTTSWICKSIQRDLLLLENQLPIFVLEELYKRVYKLNSLSFLELAFNYFEDYYPHKSTSDQNNDMVKNFKSCKHFTDLIRFFFLPEKVHAKEWNPSEHFTLNGKHECVLKTATKLNEAGVSFEKVHHRNLLDIKFKKIPVLSWFLCLGCLPCSKWVKARFQIPQLEVLQTTECVLRNLIAFEQCHYSDQPFMCNYVSLIDSLINTKEDVELLVDKEIIVHELGCHKELATMINGLCKNVVVNCNYYGKISRKINDHYNSCWKHYMGMLRSVYFRDPWRLSSTIVGVVIFLFAIVNFLRVTGLYHPKY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0517 459 Pfam Plant protein of unknown function 37 442 IPR004158 -
Apr10g0517 459 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 2 455 IPR004158 -
Apr10g0517 459 PANTHER DUF247 DOMAIN PROTEIN 2 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0517 Apr-Chr10 12212759 12214138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0517 - - gmx:100801122 750.355