Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0508 ATGGGTCTCCTTATGAGTTACATGGGAGGAACAGGATTTGGGTTAGCAACCCAGGCAACAAGTTTTGTAACAGGAACACTCTATGATCGATTTATTGAGAGACAAATCAAAGATTTTGATGCCTTCCACGCTGCAATTCTTGATATCTTCAATGCTATCAACATGGCCTTGCCTGGTAAGCATTATGATGCACCAGCACACAGGGAAATTGAGATGTTCTATGAAGAATGGCATAGTGAATCCAGGGAGGATACAAAAAAGGAAATTTTCAGCAAATTCATGTACAATAATGTGAATCTCAGCAAAGCAGACGAATCTATGATGATCACTGGGTTAGTGGCTCCTCCAGCTGCCATGGTAGCTAAGAGAGCTGGACAATCTCTGCCTCAGCTAAGTGTTGTCAAATCCATCCCTGATGTTGCCTTTGTTCCCACAGCTACTATCTTTGCTCTAATTGCTGTTAAGCTCTCCAAGAGAATGGCATTCAAGAATCTCCCATCATAA 504 0.4206 MGLLMSYMGGTGFGLATQATSFVTGTLYDRFIERQIKDFDAFHAAILDIFNAINMALPGKHYDAPAHREIEMFYEEWHSESREDTKKEIFSKFMYNNVNLSKADESMMITGLVAPPAAMVAKRAGQSLPQLSVVKSIPDVAFVPTATIFALIAVKLSKRMAFKNLPS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0508 167 PANTHER CALCIUM ION-BINDING PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0508 Apr-Chr10 12140496 12142887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0508 23 148 EF-hand Containing Proteins AT1G64850 24.242 2.06e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0508 - - var:108347314 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0508 10 12140496 12142887 Apr10g0508 10 12140496 12142887 ECH