Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0503 ATGAGTGAAGAGTTTAATTCTAAAAGGGACCCAATGGATCTCTTGCATCAGTTGGAGGACATCCTTGAATCTGATGCTCTAATTGATGAGCTGGGCTATATTCATCCATCCCAGTTTTCCTTGCTCCATGAAGAATCAGGCATTTCATCTAATTTATTTGTTGGTGCTATTCATCACTCATCAGACAGGATTGTAGGCTTTGAGGAATCTTCCAAACAAGACAGTCTAATTTTCTGGAACAGAGATCATAAATTGGGAATTTCAACTGATGTTCTTTTACCTTTGTATAGAGCTGCTAAACATGCATTTATGACTACATTTAAACAATACAGGATATGTGGCAATCAATCTGACAAAGTTGACATTTGTTTACCTGCCTCTTCATCTTGTAGCCATCTTGACAGTCTACTTCTGAGAAGCAGCAAGTCTCTTCTGCTGCTAAGCTGTGATTTTATGACTGCTTGGAATTGCAGAAAGTTAATAGTGTCCAAGAAGAAGCAGCTCTCAATGTTTATAGATGAACTTCTCCTGTCAGAACTTGTTCTCTCAAATTCACCCAAAAGCGAACAAGCTTGGAATCATAGGCGGTGGGTGATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAAAGAGATTTTGGGAAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAAATGAATTACCGTGCATGGAATCACCGTTGCTGGTTAATCCCACGCATGACTATTGAACAGGTGATGTACGAGTTAAAGAAATGCAGAAGTTGGGCTGCGCTGCATGTTGCTGATAATTGTTGCTTTCATTATCGCAGACAATTATTGCTGAAAATCATGGAGGAGCAAAATTTTGTGGAAGAAACAGTAACTTGTGGTCATAATGCTAACGTTATTCAAGCCTTGAAGGATGAACTTGATTGGAATGAAACATTGATAAAACGTTATTTGGGAAGAGAGGCTCTATGGCTTCATCGTCGCTTCCTTTCCATGTGCTGGATAAATAACTTTCTAACTAATTCTGGAGATGCATCCTACCATTCCAAAGAGGGAGTCAGCATGTATCGTGACTCTGGCACCTTTCTGCAGAATGAATTATGTCTTTTCCTCTCCTGCTCATCTTTTGTTGATAATGATTTTGACGATTTCCAAGCACAAGCCACATATTGTGCTAGTTACATACTATGGTTGAAAGTGCAAGTCCCCAAGCCTCTGGAAAATGAGCTCCTAGAGAAGATAAGAGATGTAGATCTGAAGACTGTGTTGGATAAGTCATGTCCAGAAAGATCCTCACTATTCAATAACTTTCTGAGCTAG 1320 0.3932 MSEEFNSKRDPMDLLHQLEDILESDALIDELGYIHPSQFSLLHEESGISSNLFVGAIHHSSDRIVGFEESSKQDSLIFWNRDHKLGISTDVLLPLYRAAKHAFMTTFKQYRICGNQSDKVDICLPASSSCSHLDSLLLRSSKSLLLLSCDFMTAWNCRKLIVSKKKQLSMFIDELLLSELVLSNSPKSEQAWNHRRWVIKSISANCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLIPRMTIEQVMYELKKCRSWAALHVADNCCFHYRRQLLLKIMEEQNFVEETVTCGHNANVIQALKDELDWNETLIKRYLGREALWLHRRFLSMCWINNFLTNSGDASYHSKEGVSMYRDSGTFLQNELCLFLSCSSFVDNDFDDFQAQATYCASYILWLKVQVPKPLENELLEKIRDVDLKTVLDKSCPERSSLFNNFLS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0503 439 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 170 204 IPR002088 GO:0008318|GO:0018342
Apr10g0503 439 SUPERFAMILY Protein prenylyltransferase 138 336 - -
Apr10g0503 439 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 25 399 - -
Apr10g0503 439 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 212 246 IPR002088 GO:0008318|GO:0018342
Apr10g0503 439 PANTHER PROTEIN PRENYLTRANSFERASE ALPHA SUBUNIT REPEAT-CONTAINING PROTEIN 1 25 399 - -
Apr10g0503 439 Gene3D Protein prenylyltransferase 116 367 - -
Apr10g0503 439 Pfam Protein prenyltransferase alpha subunit repeat 173 200 IPR002088 GO:0008318|GO:0018342
Apr10g0503 439 Pfam Protein prenyltransferase alpha subunit repeat 252 279 IPR002088 GO:0008318|GO:0018342
Apr10g0503 439 Pfam Protein prenyltransferase alpha subunit repeat 303 330 IPR002088 GO:0008318|GO:0018342
Apr10g0503 439 Pfam Protein prenyltransferase alpha subunit repeat 216 243 IPR002088 GO:0008318|GO:0018342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0503 K14137 - gmx:100807426 693.345