Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0495 ATGGGTTGCACGGTGTCCAAGCTTGACAACGAGGAAACGGTGCGACGGTGCAAGGAGCGTCGCCGCCTAATGAAAGACGCCGTTTACGCGCGCCACCATCTCGCGGCGGCGCACTCCGACTACTGCCGCTCCCTCCGCCTCACCGGCTCCGCACTCTGCACCTTCGCTGCTGGCGAACCCCTCGCCATCTCCGACGACACTCCCGCCGTCGTTCTCAACTCATCTACCGGCACCGCCAAAAATCCCCAACCGTCGCATCCTCCTCCTTCTCCTCCTCCTCCTCCTTTCGCCACCGTAACAAACCCTATACTCCCTCACATCCTCCCTCACATTCTCTCCGAATCGAGCCTCGCTTCTTCGCCGAGAAGCCAATCGTGGAATTTCTTCCCCACCGCGCATCAATCAACAACACCTACTTCGCAAGCTTCTTCCGCTTGGAATTGGGAGAATTTCTATCCTCCTCCGACTCCTCCAGGCTCCGAGTACTTCCGCCAGCGCTCGCAGCAGCAGAATCACGGTGAGTCGCATCAACTACCACAACGGCACCACATGGAACCTGAGGCTTCCGAATCTGAATACGATTACTTCCGCGAACAAGAACCTGTTCACGCGGACCGTGAAGAGGTTCGGTGCAGCGAGTGGGAGGACCGCTACAGTTCCACGAGCTCGTCGGAGCAGGAGGAGGGAGTCGACGGTTTAGGATCGCCGGCGAAGGCGGAATCTGTCGCCGGCGATAACTGCGATGCTCCGGCGGCGAAGGATGAGAAGGAGGAGGATGGTGTTGCGGAGAAGGTGGTGGTGAGACATAGGGATTTGAAGGAGATTATTGAAGCGGTTAGAGATAACTTTGAGAAAGCTGCGGTTGCCGGAGATCAGTTATCGGAGATGCTCGAGATCAGTAGAGCGCACCTTGATCGGAGTTTCAAGCAACTGAGGAAAACGGTGTACCACTCAAGCAGTATATTGAGCAACCTGAGCTCGACATGGACCTCGAAACCGCCATTGGTCGTTAAATATCGGCTCGATGCCGGTTCGTTGGATGGACCGGCCGGTTCAAAGAGCCTTTGCTCCACTTTGGAACGCCTTTTGGCTTGGGAAAACAAACTCTACCAGGAAGTTAAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTGGCAGCTCTGCAGAGTCAGGAATACAAAGGGGGTGATGAAGCAAAGCTAGACAAAACCAAGGCTTCCATAACAAAGTTACAGTCACTAATTCTTGTCACATCTCAAGCTGTGTCTACTACCTCATCTGCCATTAATGGCCTTAGGGACTCCGATCTTGTTCCTCAGCTTGTTGACCTTTGTCATGGAATCATGTACATGTGGAAATCAATGCACCAATACCACGAAATTCAAAGCAACATTGTGCAGCAAGTCCGTGGCCTTGTGAACCAATCATCCAAAGGTCACTCAACATCTGAATTCCACAAGCAGGCAACTAGAGATCTTGAATCAGCTGTGTCAGCTTGGCACTCCAGTTTCTGCCGCCTCATAAAATTTCAACGTGACTTTATCCTGTCTCTACATGGCTGGTTCAAGGTGAACCTTATTCCAGTCGACAATGACAACATCATCAACAACAACAGCAGTACTGAACCATCTAATGTGTTTTCCTTTTTTGATGAATGGAAACTTGCTCTTGACCGTGTCCCAGACACAGTTGCTTCTGAAGCCATCAAAAGCTTCATCAATGTTGTCCATGTAATATCAGTCAAGCAAACTGAAGAGCTCAAGATCAAAAAGAGAACTGAGACTGCTTCCAAGGAACTCGAGAAAAAATCTTCATCTCTGAGAAACATAGAAAGGAAGTTCTACAACTCATATTCTATGGTAGGCATTACCCCTCCTGAATCTGTGCCTGACAATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCCGAGAAAAAATTGGAACTAGCTTCCTGCCAAAGGCGTGTTGAAGATGAAATGGTGAGGCATTCAAAGGCTGTTGAGGTGACAAGAGCTATGACCCTCAACAATTTACAGACAGGTTTGCCTGGAGTGTTTCAGGCATTGACCAGTTTTTCTTCATTATTCACTGAGGCTCTTGAGTCAGTTTGTAGCCGTTCATATGCCATCAAGTAG 2142 0.5005 MGCTVSKLDNEETVRRCKERRRLMKDAVYARHHLAAAHSDYCRSLRLTGSALCTFAAGEPLAISDDTPAVVLNSSTGTAKNPQPSHPPPSPPPPPFATVTNPILPHILPHILSESSLASSPRSQSWNFFPTAHQSTTPTSQASSAWNWENFYPPPTPPGSEYFRQRSQQQNHGESHQLPQRHHMEPEASESEYDYFREQEPVHADREEVRCSEWEDRYSSTSSSEQEEGVDGLGSPAKAESVAGDNCDAPAAKDEKEEDGVAEKVVVRHRDLKEIIEAVRDNFEKAAVAGDQLSEMLEISRAHLDRSFKQLRKTVYHSSSILSNLSSTWTSKPPLVVKYRLDAGSLDGPAGSKSLCSTLERLLAWENKLYQEVKAREGVKIEHEKKLAALQSQEYKGGDEAKLDKTKASITKLQSLILVTSQAVSTTSSAINGLRDSDLVPQLVDLCHGIMYMWKSMHQYHEIQSNIVQQVRGLVNQSSKGHSTSEFHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKVNLIPVDNDNIINNNSSTEPSNVFSFFDEWKLALDRVPDTVASEAIKSFINVVHVISVKQTEELKIKKRTETASKELEKKSSSLRNIERKFYNSYSMVGITPPESVPDNGQGLDARDPLAEKKLELASCQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCSRSYAIK* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0495 713 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Apr10g0495 713 MobiDBLite consensus disorder prediction 161 175 - -
Apr10g0495 713 MobiDBLite consensus disorder prediction 129 261 - -
Apr10g0495 713 PANTHER UNCHARACTERIZED 179 713 - -
Apr10g0495 713 PANTHER UNCHARACTERIZED 130 171 - -
Apr10g0495 713 PANTHER UNCHARACTERIZED 1 124 - -
Apr10g0495 713 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 179 713 - -
Apr10g0495 713 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 130 171 - -
Apr10g0495 713 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 124 - -
Apr10g0495 713 MobiDBLite consensus disorder prediction 72 101 - -
Apr10g0495 713 MobiDBLite consensus disorder prediction 82 100 - -
Apr10g0495 713 Pfam Protein of unknown function (DUF632) 272 579 IPR006867 -
Apr10g0495 713 MobiDBLite consensus disorder prediction 176 215 - -
Apr10g0495 713 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0495 Apr-Chr10 11953123 11958816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0495 350 524 Acyl Lipid Metabolism Gene Families AT2G27090 36.932 7.17e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0495 - - gmx:100815888 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0495 10 11953123 11958816 Apr10g0495 10 11953123 11958816 ECH
Apr10g0495 10 11953123 11958816 Apr4g2394 4 32917746 32923534 PCT