Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0483 ATGAGAACCATACTTTTCAGCATTGACGGTGGTGGTATCAAGGGGATTATTCCAGCAACAGTTCTTGAACACTTAGACGAGGCACTTAAGGCTAAAGACCCAAATACAGCTTTAGCATATTATTTTGATATGATAGCAGGAACTAGTACTGGTGGACTTATAACTGCTTTGTTAGCCAGCCAAGACCCAAAAGACCCTAATCATCATGGGTTTACTCCAGCGGAAATCGTAAAGTTTTACATGGATAATGGCCCTCAAATATTCAATTATTCTAGACCTGGGCATGGTGCCACATTTGATGGGGAGTTCTTACATAATATAACTCGTGAGATATTGCAAGACACTCGACTGAGTGATACATTGACACATGTTGTAATCCCAACCTTTGACGTGAAGACAAAGAAACCAGTTATATTCTCAAATTATAAGGTTAGTATCACGAATTATCCCTCCTTAAATGCGAAGATGTCAGATATATGCATAGGGACTTCAGCTGCACCCCAAACTCTACCTCCCTATCAATTTGAGAATGATGGTACTGAGTTCAATTTGATTGATGGTGGTGTTGCTGCTGGTAATCCGACGCAGAGTGCCGTGAGTGAAGGTATACGATACAACAGTTTCGGCGAAATTCACGTACTATCGTTAGGAACAGGAGTAACAACAGTTATCGAACAATACGATGCTGAAATCGTTGGTAGATGGTCACAGTTGGACTGGCTATATAAAGGACCAGAATTTCTTGTTCGTGCTTCTACAGACATGACTGAAAATTACCTTGCCACAGTGTTCCCAAGCCCCCAACCTACCAAAACCTACCTTCGAGTTGAGGAATATGACCTGCCTGATTTCCTGGATAAAACGGTTAATGCTAAAAAAGAAAACATGGACAATCTCGAACAGGTGGGAAAAGACCTGTTGAAAAAAAATGTTGATTCTTTTGATATCGAAGAAACTGGTGATGGTACCTATGCCGAGGCTCTTGACAGGTTTGCTGAGATTTTGTACAACGAAAGGCAGCATCGTTTGAAAACAATGTCGATGGAGAAAAGGGGACGACCATTTATTCAAAATATGGGGGTTCCTTTTGGCCAAGCTCAAGCAGCTTAA 1110 0.4126 MRTILFSIDGGGIKGIIPATVLEHLDEALKAKDPNTALAYYFDMIAGTSTGGLITALLASQDPKDPNHHGFTPAEIVKFYMDNGPQIFNYSRPGHGATFDGEFLHNITREILQDTRLSDTLTHVVIPTFDVKTKKPVIFSNYKVSITNYPSLNAKMSDICIGTSAAPQTLPPYQFENDGTEFNLIDGGVAAGNPTQSAVSEGIRYNSFGEIHVLSLGTGVTTVIEQYDAEIVGRWSQLDWLYKGPEFLVRASTDMTENYLATVFPSPQPTKTYLRVEEYDLPDFLDKTVNAKKENMDNLEQVGKDLLKKNVDSFDIEETGDGTYAEALDRFAEILYNERQHRLKTMSMEKRGRPFIQNMGVPFGQAQAA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0483 369 Gene3D Cytosolic phospholipase A2 catalytic domain 2 348 - -
Apr10g0483 369 Pfam Patatin-like phospholipase 7 198 IPR002641 GO:0006629
Apr10g0483 369 PANTHER XYLOSE ISOMERASE 4 350 - -
Apr10g0483 369 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 6 199 IPR002641 GO:0006629
Apr10g0483 369 Coils Coil 289 309 - -
Apr10g0483 369 PANTHER PATATIN 4 350 - -
Apr10g0483 369 SUPERFAMILY FabD/lysophospholipase-like 4 315 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0483 Apr-Chr10 11731860 11735247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0483 5 342 Miscellaneous Gene Families AT2G26560 39.108 1.10e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0483 - - aprc:113850811 748.429