Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0481 ATGAAAAAAATGGCTCCCTTCCTTTTGCTTTCCCTAGTGTTTTCTTGTCAATTCATTGCTGGTTTCAATACTGAGCTTCCACCTCCATCCTATGGAAACCTAATAACCATTCTCAGCATAGATGGAGGTGGTATTAGAGGGATTATTCCAGCTGTAGTTCTTGAGCACTTGGAAAACGCTCTTAAGGCAAAGGACGAGAGTGCATCACTAGCAAATTATTTTGATGTGATTGCAGGAACTAGCACAGGAGGCATCATGACTGCTATGCTCACTGCTCCTCACCCACATGATCGCAATCGTCCTCTGTTTACTCCCAGGGAAATCATAGATTTTTATATAAATTCTGGTCCCTCTATATTCAATGAAACTAGCGGTTGGAATAATTCATACCCGGGTCCCAAGTATGACGGCAAGTTCTTACATAATAAAGCACGTGAGTTGTTGCAAAATACACGACTGGAGAACACGTTAACGAATGCTGTAATCCCAACCTTCGACCTTAAGACACTTCATCCAGTTATATTCTCAAACTTTAAGCTGAAGACAGCTCCCAGCCTTAATGCGAAACTTTCAGATATAATCATTGGGACTTCAGCTGCACCAACTTATCTACCACCCTATCACTTTGAGAATGATGACACTCAATTCAATTTGATTGATGGTGGTGTAGCAGCATGTAATCCGGCTATGGCTGCTGTGAGTGAAGTGATACAGCAACAGAAGGAGTGGAATCCTGACTTTACTCGAATGAAGTCAAACGAGCATACCAAAATCCTGTTGTTGTCAATAGGATGTGGAGCTTCAAAAGCTGAGGGTTATGATGCTGAAGTTGCAGATCACTTTTCAGCAGCTACTTGGGCAGCAACAGGCCTTCTATCTGGTGTTTATGATTATGCTTCTAAGGATATGACTGAGTTTTACCTTGCCACAGTGTTCCCAGGCCTTCAATCTTCTGACACCTACCTTCGAATTCAGGATTATAACTTGGACCCATCCATGGATTCCCTTGATAATGCCACTGAAACAAACTTGGAAAATCTTGTTAAGGTTGGACAGAACCTGCTGAAGCAACCGGTTTTGAGCATGAATGTGGTTACTTTTGTCCCAGAGAAAGAAAGAAATCAGGGTACAAATGCTGAGGCTCTTGAAAGGGTTGCTGAGATTCTGTACAAAGAGAAGGAGCTGCGTTTGAAAAAAAAGTCGATGGAAAAAAGGGGTCGACCACTTATGGAAACTGTCACAATCCCTTTTGGCCGAACTCGAACAAGTTAG 1272 0.4237 MKKMAPFLLLSLVFSCQFIAGFNTELPPPSYGNLITILSIDGGGIRGIIPAVVLEHLENALKAKDESASLANYFDVIAGTSTGGIMTAMLTAPHPHDRNRPLFTPREIIDFYINSGPSIFNETSGWNNSYPGPKYDGKFLHNKARELLQNTRLENTLTNAVIPTFDLKTLHPVIFSNFKLKTAPSLNAKLSDIIIGTSAAPTYLPPYHFENDDTQFNLIDGGVAACNPAMAAVSEVIQQQKEWNPDFTRMKSNEHTKILLLSIGCGASKAEGYDAEVADHFSAATWAATGLLSGVYDYASKDMTEFYLATVFPGLQSSDTYLRIQDYNLDPSMDSLDNATETNLENLVKVGQNLLKQPVLSMNVVTFVPEKERNQGTNAEALERVAEILYKEKELRLKKKSMEKRGRPLMETVTIPFGRTRTS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0481 423 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Apr10g0481 423 PANTHER PATATIN 6 407 - -
Apr10g0481 423 Gene3D Cytosolic phospholipase A2 catalytic domain 28 402 - -
Apr10g0481 423 Pfam Patatin-like phospholipase 38 232 IPR002641 GO:0006629
Apr10g0481 423 SUPERFAMILY FabD/lysophospholipase-like 34 360 IPR016035 -
Apr10g0481 423 PANTHER XYLOSE ISOMERASE 6 407 - -
Apr10g0481 423 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 38 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0481 Apr-Chr10 11684196 11689103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0481 26 396 Miscellaneous Gene Families AT2G26560 46.835 3.52e-104 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0481 - - gmx:100802114 623.624