Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0471 ATGACAACATCAACAGAGACAGAGAAGAAGCAGGAGGAGGAATCGGAACAAGTGGTGACTCCATGGGAGGTTAAGGTCAAAGACGGAGCCAAAATCGATTACGACAAACTCATCGACCGTTTCGGTTGCCAGAGACTCGACGATGCCCTCCTTAACCGCCTCCACCGAATCACTTCTCGCCCCCCTCATGCCTTCCTACGACGCGGCGTTTTCTTCGCTCACCGTGATTTCGGGGAGCTTCTGGACGCGTACGAGAAGGGCGATAAGTTTTACTTGTATACTGGACGTGGTCCTTCCTCTGAATCCTTGCATTTGGGCCATTTGATTCCCTTCATGTTCACCAAGTATTTGCAAGACACATTTAAAGTTCCTCTGGTAATACAGCTCACTGATGATGAGAAGTTCTTCTGGAAAAATCTTACTATAGAGGACTGCCGGAGACTTGCAAGAGAGAATGCAAAGGACATCATTGCTTGTGGTTTTGACATTTCAAAGACATTCATCTTTGCTGATTTCAATTATGTTGGTGGTTCTTTCTACACAAACATGATAGAAGTTGCAAAGCGTGTGACTTATAACCAGGCTGTTGGCATTTTTGGTTTCACTGGGGAAGATCATATTGGAAAAGTTAGTTTTCCACCTGTGCAGGCAGTTCCATCATTTCCTACTTCATTTCCTCACCTATTTGCTGGAAAAAAGAATCTCCGTTGTTTAATTCCTTGTGCAATTGACCAGGATCCTTACTTTAGAATGACAAGAGATGTTGCTCCTCGATTAGGGTACCACAAGCCAGCCTTGATTGAATCATTATTCTTCCCTGCATTACAGGGGGAAGCAGGAAAAATGTCAGCCAGTGACCCCAATTCTGCAATATATGTGACTGATTCTGCTAAAGATATAAAGAACAAGGTGAACAAGTATGCATTTTCTGGTGGCCAAGATTCTATAGAGAAACATAGGGAATTAGGGGCAAATCTTGAGGTAGATATACCAATCAAATACCTTTCTTTTTTCCTAGAAGATGATGATGAACTTGAACACATCAAGAAGGAGTATGGGGCTGGACGCATGCTAACTGGTGAGGTGAAGAAGCGCCTAAGTGAAGTTTTGACTGAAATTGTGGAGAGACATCAAAGGGCTCGAGCTGCTGTGACTGACGAGATGGTGGATGCATTTATGGCCGTCAGACCACTTCCGCACATGTTTGACTGA 1212 0.4406 MTTSTETEKKQEEESEQVVTPWEVKVKDGAKIDYDKLIDRFGCQRLDDALLNRLHRITSRPPHAFLRRGVFFAHRDFGELLDAYEKGDKFYLYTGRGPSSESLHLGHLIPFMFTKYLQDTFKVPLVIQLTDDEKFFWKNLTIEDCRRLARENAKDIIACGFDISKTFIFADFNYVGGSFYTNMIEVAKRVTYNQAVGIFGFTGEDHIGKVSFPPVQAVPSFPTSFPHLFAGKKNLRCLIPCAIDQDPYFRMTRDVAPRLGYHKPALIESLFFPALQGEAGKMSASDPNSAIYVTDSAKDIKNKVNKYAFSGGQDSIEKHRELGANLEVDIPIKYLSFFLEDDDELEHIKKEYGAGRMLTGEVKKRLSEVLTEIVERHQRARAAVTDEMVDAFMAVRPLPHMFD* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0471 403 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 9 403 - -
Apr10g0471 403 PANTHER BNAA01G33520D PROTEIN 9 403 - -
Apr10g0471 403 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 98 108 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Apr10g0471 403 CDD TrpRS_core 91 373 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 Pfam tRNA synthetases class I (W and Y) 88 373 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Apr10g0471 403 PRINTS Tryptophanyl-tRNA synthetase signature 103 119 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 PRINTS Tryptophanyl-tRNA synthetase signature 155 174 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 PRINTS Tryptophanyl-tRNA synthetase signature 237 258 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 PRINTS Tryptophanyl-tRNA synthetase signature 281 291 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 TIGRFAM trpS: tryptophan--tRNA ligase 89 394 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Apr10g0471 403 Gene3D - 285 402 - -
Apr10g0471 403 Gene3D HUPs 8 284 IPR014729 -
Apr10g0471 403 SUPERFAMILY Nucleotidylyl transferase 16 396 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0471 K01867 - gmx:100787194 723.005