Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0438 ATGGCTACATATTCTTCCCCTCCTTCATCACCTCCTCCATCATCATCTTCTTCAATTCCTTCCCCAAGATCTAGCATGTTTTACTATGCTGGAAGTGAAAATCACTATGAGGAGCCTCACTTCCTCCAAGCTTGCTTTCTTTGCAACAAACCACTTGGCCAAAACCATGACATCTTCATGTACAGAGGGAACACACCATTCTGTAGCAAAGAGTGCAGGCAGGAACAGATAGAGCATGATGAGGCAAAGGAGAAAAGTTGGAAGCTTTCTTCCAAAAGGGGTGTGAGACAATCAGAGACCAATCAAAACTCCACACCCAACAAGACTGTGAGAACAGGCACAGTTGCAGTTGCCTAA 357 0.4482 MATYSSPPSSPPPSSSSSIPSPRSSMFYYAGSENHYEEPHFLQACFLCNKPLGQNHDIFMYRGNTPFCSKECRQEQIEHDEAKEKSWKLSSKRGVRQSETNQNSTPNKTVRTGTVAVA* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0438 118 MobiDBLite consensus disorder prediction 93 112 - -
Apr10g0438 118 MobiDBLite consensus disorder prediction 1 24 - -
Apr10g0438 118 ProSiteProfiles Zinc finger FLZ-type profile. 40 84 IPR007650 -
Apr10g0438 118 MobiDBLite consensus disorder prediction 79 118 - -
Apr10g0438 118 PANTHER FCS-LIKE ZINC FINGER 3 23 118 - -
Apr10g0438 118 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 23 118 IPR044533 -
Apr10g0438 118 MobiDBLite consensus disorder prediction 1 18 - -
Apr10g0438 118 Pfam zinc-finger of the FCS-type, C2-C2 33 83 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0438 Apr-Chr10 10993100 10994638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0438 - - aprc:113850222 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0438 10 10993100 10994638 Apr10g0438 10 10993100 10994638 ECH