LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr10g0429	ATGGCTGGAGAGCCACGCCTATTAGAGATCCACATGAGGGTCAACTCGAAGAGGAGCAACAACCTGGTACACCCGATGGCGGTGGAGACCGCACCCTCTGCATCACCGGCTCAGCCGGTGAAGCATTACAGGAAGTGGTTCCCCTGGTTGATACCGCTTTTTGTCGTTGCCAACGTCGTCGTTTTCGTTATCACTATGTATGTCAATAACTGCCCCAAGAACTCTGTCTCCTGCATTGCCTCCTTCTTGGGTAGTTTCTCCTTTCAGCCCTTCAAAGAAAACCCCCTCCTGGGCCCTTCATCATTGACGCTACAGAAGATGGGTGCTCTTGATGTAAGCAGAGTGGTTCACAGACACCAGGGATGGCGCCTCATCACTTGTATGTGGCTACATGCTGGGGTTTTCCATCTGTTGGCAAATATGTTGGGTATTCTAGTCATTGGAATTCGACTTGAGCAAGAGTTTGGATTTGTGCTTGTTGGACTGCTATTTGTCATATCTGGATTTGGGGGTAGTTTGCTTTCTGCTCTTTTCATTCAGACAAATATTTCTGTTGGTGCCTCTGGTGCACTTTTTGGCTTGCTGGGAGGCATGCTTTCAGAACTCATTACTAACTGGACTATCTATGATAACAAGCTAGCAGCACTCCTCACCCTTGTGATCATCATTGTTATCAATCTAGCGGTGGGGATTCTCCCACACGTGGACAATTTTGCTCATATTGGAGGCTTTCTTACTGGATTTCTTCTTGGATTTGTGTTTTTGATACGTCCTCAGTTTGGATGGGTTAACCAACGATATGCTCCCCTAAATTATTCTCCAGCACGAGCTAAGCCTATGTTCAAGAAATATCAATGCTTCTTGTGGGTCCTGTCCTTGATCATTCTAGTTGTTGGGCTTTCTGTTGGGCTAGTTGCACTTCTCCGTGGTGTTGATGCAAATGATCACTGCTCCTGGTGCCATTACCTTTCTTGTGTTCCAACTTCAAGATGGAGCTGCCATACAGAGCCAGCATATTGTGAGTCAAACCAGTTTGGCAACCAGCTGAACGTAACATGCTCGAGCAATGGTAAATCTAGTACATACTACATGCAGAATCCAACCAGTTCCCAGATCCAGCAATTGTGTACTCAGCTTTGTCGTTGA	1146	0.4651	MAGEPRLLEIHMRVNSKRSNNLVHPMAVETAPSASPAQPVKHYRKWFPWLIPLFVVANVVVFVITMYVNNCPKNSVSCIASFLGSFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLVGLLFVISGFGGSLLSALFIQTNISVGASGALFGLLGGMLSELITNWTIYDNKLAALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPARAKPMFKKYQCFLWVLSLIILVVGLSVGLVALLRGVDANDHCSWCHYLSCVPTSRWSCHTEPAYCESNQFGNQLNVTCSSNGKSSTYYMQNPTSSQIQQLCTQLCR*	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr10g0429	381	Pfam	Rhomboid family	116	257	IPR022764	GO:0004252\|GO:0016021
	Apr10g0429	381	SUPERFAMILY	Rhomboid-like	45	259	IPR035952	-
	Apr10g0429	381	Gene3D	-	41	257	IPR035952	-
	Apr10g0429	381	PANTHER	RHOMBOID-RELATED	15	380	IPR002610	GO:0004252\|GO:0006508\|GO:0016021
	Apr10g0429	381	PANTHER	RHOMBOID-LIKE PROTEIN 4	15	380	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr10g0429	Apr-Chr10	10494495	10503901	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr10g0429	-		-	gmx:100801675	629.787