Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0358 ATGGGAACAAAGAGAGGTAATTCCCCAATGAATGTTTTGTTTGAAAGGCTGAGGAAGCAGTCTATAAAAGTGAAGATCCTTTTGGGGGCATTGCTTGCTGTTTGTGTTTTGGTGGCTTTAAATTTCATCATCAAAGATCACTACTATTTCTTCATAGCCTCTGCAGCAACCCATGCTGCTGGAATAATTGCCCTCATATACAAGCTCTTTGCCCAGAAGACCTGCTCTGGTTTATCACTCAAGACCCAAGAGCTCACTGCTTTATTCATAGCTGCAAGATTTAGTTGTAGCACCTTTATGGTGGCTAACATCCACACTGTGCTAGATTTGATATCACTCTTGTCAACTTTATTGGTTATATGGATGATAAGATTCAAGTTAAAGTCATCTTATATCAAAGAGCTTGACAACCTGCGACTTTCCTTTGTGGTGGTTCCTTCGGCAATCCTTGCGATACTAATACACCCTTTTACAACTCATTGGCGTTTTATTCGAGTCATTTGGGCTTTCAGTTTGTATTTGGAAGCTGTTTCTGTTCTCCCTCAACTTCGTTTTATGCGGAACGCAAAGATGATTGAAACATTTACAGGATATTATGTATTCGCTCTTGGTATTTCAAGATTCTTGGCATTGGCTCACTGGGTTATTCAGATTTATGAGACAAAAGGGTCATTTCTATTTTTGGCTGGGAGTGGCTACTTCTGGTTCTTGGCAGCTTTTCTGGCAGAGATGGTTCAATCGTTGATCTTGGCCGACTTCTGTTATTATTACATGAAGAGCTTCATGAAAGGACAACTTATGAGGAAAATGCCTGTTTAA 819 0.3993 MGTKRGNSPMNVLFERLRKQSIKVKILLGALLAVCVLVALNFIIKDHYYFFIASAATHAAGIIALIYKLFAQKTCSGLSLKTQELTALFIAARFSCSTFMVANIHTVLDLISLLSTLLVIWMIRFKLKSSYIKELDNLRLSFVVVPSAILAILIHPFTTHWRFIRVIWAFSLYLEAVSVLPQLRFMRNAKMIETFTGYYVFALGISRFLALAHWVIQIYETKGSFLFLAGSGYFWFLAAFLAEMVQSLILADFCYYYMKSFMKGQLMRKMPV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0358 272 Pfam ER lumen protein retaining receptor 74 216 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr10g0358 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 4 271 - -
Apr10g0358 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 4 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0358 Apr-Chr10 8782874 8805333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0358 1 272 Miscellaneous Gene Families AT3G25160 61.029 1.35e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0358 - K10949 gmx:100790210 422.165