Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0283 ATGGCAACCCAAGAATACTACACACCTTCACTTCGCATCGACCCACCACCCGTGACGCCTCTAAAGTACTCAAACCGCGTTCGGGTGAAGACACTTCTCGAGAAACGCGAGAGTGTGGTGGCCCAGAGAGTGGTCGTTGGCGGGTGGGTCAAGTCCGCCAAGGAGGTCGAGAAGTCGTCGCCGCCGCCGCCGCCGTTGACGGACGACGCCGTCGACGATACGAGGAAGAACAAAGACGTGTCGTGCGTGGAGATTCTGCAGTCTCGGATTCCTTTGATTCGTAACATCCTTGAGGTCTTCGGAGGAAGCGGTTATAGTCAGAAAAAGAAACGTGAGCCTTCAGTGCCTCCTAAGGTTGTCCCTCCCAAACCTTCCACTGCGTATCTGCTTCTCTCCGATGGTTCCTGCGTTGGAAGCCTTCAGGTTGTTGTTGATTCCTCAGTAGCTGCCCCTAGCCGGCTTCTGGCTACTGGAACATGTATATTAGTGGAAGGTCAACTACAACGACCATCATCAGAAGGGAAGCATGCTATTGAGCTTAAAGCTGAAAAAATTCTTCACATTGGGACTGTTGATTATGATAAGTATCCATTGTCAAAGAAACGAATTCCACTTGAAATGTTAAGAGATTTTGCCCAATTTCGGCCTCGAACAACCACGGTGGCAACTGTCATGCGAATTCGTAGTGCTCTCTCTTTTGCAGTCCACTCATTTTTCCACAAACATGAATTTATTGGAGTGCAAATACCCACAATAACTGCCACAGACTGCGAAGGATTTAGCAACATGTTCCAGGTCACTACCCTGAATCAGAAAGCAGAGAAGCAAAATCTAAACACCATCTATGAGAGTGATGGTGTAAACCTTGAAGTTATAAAGGCAGCAGCAAAAGAGAAAAGCAACTTAGTTGAACAATTGAAGAGAAGTGAAAGCAATAGGGAGGCACTGGCTGCAGCAGTGCAGGATTTGAGGAAAACAAATGAATTGGCATCACAATTGGAAGCAAGAGAAAAGAAAAAGTTGGGAACTTATTTGAAGGATAACAAAGCAGACTCTTCCAAAGATTTTTTCCATTCCCAAACATACTTGACTATCTCTGGTCGCTTACATCTTGAGAGTTATGCATGTGCCCTTGGAAATGTCTACTCATTTGGTCCTAGATTTCAAGCAGATAAAACAGATTCTTCTAAACTTGCTGCTGAAATGTGGATGGTTGAGGTTGAAATGGCCTTTTCTCAGTTAAAGGATTCCATGAATTGTGCTAACGACCTTTTCAAGTACCTCTGCAAGTGGGTACTGGAAAATTGCTCTGAAGATATGAACTTTGTTTCTGAAAGAATTAACAAAGACTGTATCAATCGTCTTCAGCAGATTGTATCAGGTTCCCCTGAAACAATGTCCTACAACGAAGCTATAGATGTTCTAAGAAAGGCTGAAGATAAGAAATTTGATACAAACTTTGAATCAGGTGTTGTACTCACTTCAGAGCACTTAAGCTATCTAGCTGATAACATCTACAAGAAGCCGATTATGATATATAATTATCCAAAAGAAGCTAAGCCATTTTACGTTCGCCAGAATGATGATGGAACCGTAGATGCATTTGACTTGATTGTGCCAAAGGTGGGAACAATAATTTCTGGTAGCCAAAATGAGGAACGCCTTAACTTGATAAGTTCAAGAATTAATGAGTTGGGCTTGCCAAGAGAGAAGTATGAATGGTACTTAGATCTTCGTCAAAATGGAACAGTGAAGCACTCTGGTTTCTCTCTAAGGTTTGATCTTATGGTCCTCTTCGCAACTGGCCTTCTCAATGTCAGAGATGTTATCCCTTTTCCAAGAAGCTATGGCATGGTCAACAATTAA 1866 0.433 MATQEYYTPSLRIDPPPVTPLKYSNRVRVKTLLEKRESVVAQRVVVGGWVKSAKEVEKSSPPPPPLTDDAVDDTRKNKDVSCVEILQSRIPLIRNILEVFGGSGYSQKKKREPSVPPKVVPPKPSTAYLLLSDGSCVGSLQVVVDSSVAAPSRLLATGTCILVEGQLQRPSSEGKHAIELKAEKILHIGTVDYDKYPLSKKRIPLEMLRDFAQFRPRTTTVATVMRIRSALSFAVHSFFHKHEFIGVQIPTITATDCEGFSNMFQVTTLNQKAEKQNLNTIYESDGVNLEVIKAAAKEKSNLVEQLKRSESNREALAAAVQDLRKTNELASQLEAREKKKLGTYLKDNKADSSKDFFHSQTYLTISGRLHLESYACALGNVYSFGPRFQADKTDSSKLAAEMWMVEVEMAFSQLKDSMNCANDLFKYLCKWVLENCSEDMNFVSERINKDCINRLQQIVSGSPETMSYNEAIDVLRKAEDKKFDTNFESGVVLTSEHLSYLADNIYKKPIMIYNYPKEAKPFYVRQNDDGTVDAFDLIVPKVGTIISGSQNEERLNLISSRINELGLPREKYEWYLDLRQNGTVKHSGFSLRFDLMVLFATGLLNVRDVIPFPRSYGMVNN* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0283 621 Pfam tRNA synthetases class II (D, K and N) 353 614 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Apr10g0283 621 Pfam tRNA synthetases class II (D, K and N) 207 271 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Apr10g0283 621 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 22 621 - -
Apr10g0283 621 Coils Coil 289 336 - -
Apr10g0283 621 Gene3D Bira Bifunctional Protein; Domain 2 197 619 IPR045864 -
Apr10g0283 621 MobiDBLite consensus disorder prediction 53 74 - -
Apr10g0283 621 PANTHER ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2-RELATED 22 621 - -
Apr10g0283 621 CDD EcAsnRS_like_N 127 190 - -
Apr10g0283 621 SUPERFAMILY Class II aaRS and biotin synthetases 184 616 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0283 Apr-Chr10 6801470 6807112 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0283 K01893 - gmx:100787363 905.59