Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0239 ATGGCTTCCCTCTCCAAAGGCGATCAGAATCAGGTTCTGGTGGAGCGTAAATCGTGTGCGAGAGTTTTGACATTAAACAGGCCTAAGCAATTGAATGCGCTCTCTTTTTATATGGTGTCTCGGCTGCTGGAAGTTTTTCATGAGGATGAGGGAAACTCTGATGTTAAATTGATTATCGTGAAGGGAAATGGAAGGGCATTTTGCGCAGGTGGTGATGTTGCAACTGTTGTTCGTGATGCAAGAGGAGGTGATTGGAAGTCTGGTGCAAAATATTTTAACATAGAATTTAAATTGAATTACATGATGGCAACATATAGCAAGCCCCAGATTTCAATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTATACATGGAAGATTTCGTGTTGTTACGGAGAATACGGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTTCCTCATATTTCTTGTCTAGACTCGCTGGATTTTTCGGAGAATACGTTGGTCTTACAGGTGCTAGATTGGATGGTGCGGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCAACTTCGAAATTGTCTTTGTTGGAAGAATCATTATGCAAGGTGGAAACCAGTGATTCATCTGCAATATCTGCAGTTATTGATAAGTACACCGAACAACCTTCCCTAAAAGAGGATAGCGTTTATCACAGGATGCATATGATCAATAAGTGTTTCTCTAGAAGAACAGTTGAGGAAATATTATCTTCTCTTGAGGAGATGGAAGCTATGAGTAAGGCTGATAATTGGATTTTGGCAACTATTCAAACCTTAAAGAAAGCATCTCCAACAAGCCTTAAAATCTTTCTTAGATTGATTAGACAAGCCAGGCTCCTAGGTATTGGTCAATGCCTTGTTTGTGACTATAGAATTGTCTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTGTTAGACAAAGACAGGAACCCAAAGTGGGAACCTTCCAAATTGGAGTTTGTTAGTGATAGTGACGTTGATCGTTACTTCTCCAAGCTTGACGATGAAGGATGGGAGGATTTGGATCTTCCTAAAAGGTTCAACAATCTGCCTGCATATGCTATTTCAAAGCTGTAA 1152 0.4054 MASLSKGDQNQVLVERKSCARVLTLNRPKQLNALSFYMVSRLLEVFHEDEGNSDVKLIIVKGNGRAFCAGGDVATVVRDARGGDWKSGAKYFNIEFKLNYMMATYSKPQISILNGIVMGGGAGASIHGRFRVVTENTVFAMPETALGLFPDVGSSYFLSRLAGFFGEYVGLTGARLDGAEMLACGLATHFVPTSKLSLLEESLCKVETSDSSAISAVIDKYTEQPSLKEDSVYHRMHMINKCFSRRTVEEILSSLEEMEAMSKADNWILATIQTLKKASPTSLKIFLRLIRQARLLGIGQCLVCDYRIVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLEFVSDSDVDRYFSKLDDEGWEDLDLPKRFNNLPAYAISKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0239 383 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 383 IPR032259 GO:0003860
Apr10g0239 383 SUPERFAMILY ClpP/crotonase 10 341 IPR029045 -
Apr10g0239 383 Gene3D - 6 370 - -
Apr10g0239 383 CDD crotonase-like 12 196 - -
Apr10g0239 383 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 383 - -
Apr10g0239 383 Pfam Enoyl-CoA hydratase/isomerase 21 355 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0239 Apr-Chr10 5722135 5747641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0239 3 383 Miscellaneous Gene Families AT5G65940 66.142 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0239 K05605 - gmx:100170729 626.32