Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0195 ATGTGGAACAACAATCCGCTTTCTCCGTTCGTCGATTCATTTTCTGTTCCACAGATTTCCTTCTTTGCTATGGAAGACGCAGACTCAGTTGCTACACTAATAGATTCTACAACTTCTAAGATACAACAGCTGCAAAGGGCTTTTGCTGAACTTGAAAGTTATCGAGCTGTTACTCTTAATTTGAAATGGAAAGAACTAGAGGAGCACTTTCATGGTCTTGAGAAATCTTTGAAGAGGCGCTTTCATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAGACAATGAAAGCTCGTGAGTTGTTGGAGAAGCGTGAAGCAGATGTTTTTGCCAAGGAGCAAGCCTCATTGCAGAAACTCCAAGAGAAAAGGGATGATGCTGTATTTGCCATTGTAAATGCTCGAGAAAAACACAGGAAGGTTTCATCACGTGAATCGACTATTGTCTCAAATGGGGATAAAGAGAGGATACCAAGAGTGGAGGAGAAACCTATGAATAATGTGTTCATTGCTGCTGAAGGTAACATGGAAGATGTAAAGCTTTCTCCTGAAAATGGAAATGTGGAGTTGATGTCTTATCCAGAGTTGGTGAAACTATGTAAAGAGGTGGATGCTGCTGGACTACACAAATTCATATCTGATAACCGTAAGAACCTGGCTGCTTTAAGGGAGGAAATACCACATGCATTAGGAGCTGCTCCTAGTGCAGCCTGTTTAGTCTTAGATTCTCTGGAAGGATTTTACTGTATGGAAGTGTCAAGCCTGGATGTAAAGAAGGATGCTAACTTATTGGGTCTTCGCCGAACCTGTATCATGCTGATGGAATGTTTAAGTGATTTCTTGAGCAGCTCAGATTGTGTTTCTGATGTAATTTCAGAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAATGGAAACCAAGATTGGATGCTCTTGACATGGATGCAAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGTATTGCCTCTGGTTTTGATAAGGAAGAATTATTCAGACTGATACCAATGGTTTCTCGGCGCCGCCAAACTGCTGATCTATGCCGTTTCCTTGGGCTGTCAGAAAAGATGCCTGGTGTAATTGAGGTTTTGGTGAACAGTGGCCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAATTTTCTCCCGTTTCCTTACTGAAGTCTTACTTGAAAGATGCTAGAAAAGCTTCTTCTCCTGTTAAAAGTGTCAATTCATCTCCCACTGCACAGATTGAGGTTAATGAACGAGAGCTGATCGCTCTTAAGGCTGTAATCAAGTGCGTTGAAGAACATAAACTTGATGAGCAGTATCCTCTGGATCCTCTCCAGAAACGATTGCTCCAGCTAGAGAAGGCCAAAGCTGACAAGAAGAGGGAAACTGAAGCGACAAAGCCTCAACCCAAGAGGCCCCGAGCTAATGGTGTGGGATACGGTCCTCGTGTCACTAACATTCCGTCTGACAAAACTTGCTATGCTAGAGTTGCTGACAGGTACCCACAGTACGTATATGATCGACCTTACATGTACCCTGCGCCAACTGAAAATCATTGCCCCCCTCTCTTGAGCACTGCAACGTATAACCTCTCCCCCAGTCATGGCAACTACTTCGCAAATGGTTATCAGTACCAAGCTACATATCTCCACTAG 1710 0.431 MWNNNPLSPFVDSFSVPQISFFAMEDADSVATLIDSTTSKIQQLQRAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKARELLEKREADVFAKEQASLQKLQEKRDDAVFAIVNAREKHRKVSSRESTIVSNGDKERIPRVEEKPMNNVFIAAEGNMEDVKLSPENGNVELMSYPELVKLCKEVDAAGLHKFISDNRKNLAALREEIPHALGAAPSAACLVLDSLEGFYCMEVSSLDVKKDANLLGLRRTCIMLMECLSDFLSSSDCVSDVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLLASFGIASGFDKEELFRLIPMVSRRRQTADLCRFLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPVSLLKSYLKDARKASSPVKSVNSSPTAQIEVNERELIALKAVIKCVEEHKLDEQYPLDPLQKRLLQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNIPSDKTCYARVADRYPQYVYDRPYMYPAPTENHCPPLLSTATYNLSPSHGNYFANGYQYQATYLH* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0195 569 Pfam Frigida-like protein 192 481 IPR012474 -
Apr10g0195 569 MobiDBLite consensus disorder prediction 473 487 - -
Apr10g0195 569 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 26 569 - -
Apr10g0195 569 PANTHER FRIGIDA-LIKE PROTEIN 26 569 - -
Apr10g0195 569 MobiDBLite consensus disorder prediction 473 500 - -
Apr10g0195 569 Coils Coil 460 480 - -
Apr10g0195 569 Coils Coil 74 104 - -
Apr10g0195 569 Coils Coil 34 54 - -
Apr10g0195 569 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0195 Apr-Chr10 4551344 4556582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0195 - - aprc:113851605 1127.46