Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0178 ATGTCGCAGCAAATGCAAAGCAGCAACAACATGGGAATCGCAGTGAGCGAGGTGTTTTGGACCCTCGTTGATAAAGCGGACAAAAAATTCTCCAAAATCAGAGACTTACCTTTTTACCAGCGTAGCAGGCATGATACATACTTTTTCAAGGTGTTCAAGGTGTACACACAGTTATGGAAGTTTCAACAGGAGAATCGGCAGAAGCTGGTTGAAGCTGGGCTTAGGAGATGGGAGATTGGTGAGATTGCATCTCGCATTGGGCAGCTGTATTTTGGGCAGTACATGCGCACAAGTGACGCAAATTATCTATCAGAGTCATATATATTCTATGAAGCCATATTGACTCGGGAGTATTTTAAGGAGGGGTTGTTTCAGGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCTAGATTCATAATGGTGTGTTTGGTTTTGAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAACTTAAAGTATTAGTTGAAGAATGCAAGAGAACATTTCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAGGAAATAGTCAGATTTTTAAAAGCTGACTCTGCTTTTGTGAATATCCGGCCCTTGAGATATAGTCTAGTTTTGGACCCTCATCCTGATACTTTACCACATGTTGCTGCAGCCATCACAAAGCGACATTTGAAATTACGAGATGCTGTATTAACTAGTTTCCATCCAAATGAGGTAAAGTTTTCAGAGCTCACTATTGACACTTTTAGGATACTTCAATGTCTGGAGTGGGAACCTAGTGGCTCATTTTACCAACCTAGTGGTTCAAAACTTAGTCAGAATGGGGCAACTGGAACTAGTCGTATCAGTTACATCCAAGATATTGCTGATCCTACCTTACCAGCAAACCCAAGGAAAGCTGTGTTGTACCGCCCTTCACTGACACACTTAATAGCTGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGGTCTTTTGGTGCTGCACAGAATGAATCTGGCTGCATACACTTTGGTCTTCATGGAGATAGAGGATCAAACTGCATATATCCGTCTGACTTTCTACCATTTACTAGAAGACCACTTCTTTTAGTAATTGATAACGACAGTAGCAAAGCTTTTAAGGTCATAGCAGGAGCAGAAAAGGGAGAGTCAGTTGCTATGCTCCTTTCTCCAAGCTGTTCACCTGCTGTGTCTGATTGCTCACACAATTCAAATGGGAGTCTATTCACCATGTTCCTTACAACTCCCCTGCAAGCTTTCTGTCTGCTGCTAGGACTTTCAGGCAATGATATTGATATGGACACATACAACAAAGCTGAAATGTTGCTCTCGTCTTCATTAAATAACTGGGGGCTAGCATTGGCAACTTCAGACACACTTGATCCTGTTTGGGGACAGATATTAGGTGATCCCTTCATAAGGAGACTTCTTTTGAGATTCATATTCTGCCGGGCAGTGTTGACCTTGTATGCACCAGTTTACAATAAAAGTGAATTTCTTCCAACATGTGTTCCTTCTCTTCCAATGTCTGTCCTGCCCCCAAGTTCCTCATATCAGAGTGTAATTCTGAGTCTAGCCACAATTTTTGGTGCAACTAAGCACTTCATCTTCTCAGAGGACATTCTTCCTGAAAATATACAAACCAACGTGAATCAGTTGTGA 1677 0.4174 MSQQMQSSNNMGIAVSEVFWTLVDKADKKFSKIRDLPFYQRSRHDTYFFKVFKVYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMRTSDANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVEECKRTFQESDFKEWKLVVQEIVRFLKADSAFVNIRPLRYSLVLDPHPDTLPHVAAAITKRHLKLRDAVLTSFHPNEVKFSELTIDTFRILQCLEWEPSGSFYQPSGSKLSQNGATGTSRISYIQDIADPTLPANPRKAVLYRPSLTHLIAVLATICEELPSDGSFGAAQNESGCIHFGLHGDRGSNCIYPSDFLPFTRRPLLLVIDNDSSKAFKVIAGAEKGESVAMLLSPSCSPAVSDCSHNSNGSLFTMFLTTPLQAFCLLLGLSGNDIDMDTYNKAEMLLSSSLNNWGLALATSDTLDPVWGQILGDPFIRRLLLRFIFCRAVLTLYAPVYNKSEFLPTCVPSLPMSVLPPSSSYQSVILSLATIFGATKHFIFSEDILPENIQTNVNQL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0178 558 PANTHER PROTEIN SCAI 1 328 - -
Apr10g0178 558 PANTHER PROTEIN SCAI 333 552 - -
Apr10g0178 558 Coils Coil 153 173 - -
Apr10g0178 558 Pfam Protein SCAI 22 328 IPR022709 GO:0003714|GO:0006351
Apr10g0178 558 Pfam Protein SCAI 345 496 IPR022709 GO:0003714|GO:0006351
Apr10g0178 558 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 333 552 - -
Apr10g0178 558 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0178 Apr-Chr10 4231808 4241072 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0178 - - gmx:100810202 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0178 10 4231808 4241072 Apr10g0178 10 4231808 4241072 ECH