Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0177 ATGGCGTTGTTGAGTAGTGGCACTCCATGGTCGAAGGTTATTGCTCCTCCAATTTTTCATCGTTCATACACCACTCGAACCTCCTTCTTCCGAAGATCCTTCACAGTCTCTGCTCTCTCAGAATCTTCCCTTCCCGTTCGCGTTCGTTTCGCTCCTTCTCCTACTGGTAACCTTCATGTTGGTGGTGCCAGGACGGCCCTTTTCAATTACTTGTTTGCCAGGTCCAAAGGTGGGAAATTTGTGCTGAGAATTGAGGACACTGACTTGGAGAGGTCTACAAGGGAATCTGAAGAGGCCATGCTCAAAGATCTTTCTTGGCTGGGCCTTGATTATGATGAGGGGCCCGGTGTTGGAGGGGAATATGGTCCCTATAGGCAGTCTGAGAGAAACGCTTTGTACAAACAGTATGCTGAGAAACTCCACCAATCGGGTCATGTTTATCGCTGCTTCTGTTCTAATGAGGAACTAGAAAAAATGAAGGAGGATGCTAAATTAAAGCAACTGCCTCCAGTGTACACGGGTAAATGGGCAAGTGCAACAAATGAGGAAGTAGAAGAAGAGCTGTCAAAAGGAACTCCATATACATACCGGTTTCGTGTTCCTGAAGGAAGTTTAAAGATTAATGACCTAATACGAGGCGAAGTTAGTTGGAACTTGGATACACTTGGAGATTTTGTGATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTGGATGATGCTACCATGGCTATTTCCCATGTTATCAGGGCAGAGGAGCATTTGCCAAACACTCTAAGACAGGCATTAATATACAAGGCACTAAGATTTCCCATGCCTTACTTTGCACACGTTTCATTGATTTTAGCTCCTGACAGGAGTAAATTATCGAAACGACATGGGGCAACATCAGTGGGTCAGTTTCGGGAGATGGGGTACCTACCTGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGTGATGGGACTGAAAATGAGTTTTTTACTCTTGATCAACTTGTTGAAAAATTCACTATTGAACGTGTTAACAAAAGTGGTGCTATTTTTGACTCAACAAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCTCGTCCGTCAGAGGAGCTGACCAAACTTATTGGAGAGCACTGGAAGACATCTGGCTTACTTACAATATCAGCAGGGCCCTTTATTGATGAAGCAGTGCAACTACTTAAGGACGGGATTGATTTGATACCTGAAGCAGACGAGGCACTTTCTAAGTTGCTTTCTTATCCTTTGCATTCTACTTTACAGAGCCATGAAGCAGAATCTGTCTTGCAAGATAATCTTTCTGAATTTGCTGGTAGCCTCTTGGGTGCCTATGATAGTGGTGATTTAGTAGCAGCCCTTGAAGAAGGCCAAGCTGGCTGGCAAAAATGGGTGAAAGGCTTTGGTAAATCGCTAAAGCGCAAGGGAAAATCGCTTTTCATGCCACTCCGACTTCTGCTGACCGGAAAACTCCATGGACCTGACATGGGGGCTAGTGTTGTATTGCTCTATAAAGCTGGGAGTGGTGGTATAGTTGCTCCTGAAGCTGGTTTTGTAACAGTGGATGAAAGATTTAAAATGCTTAGGCAAATCAACTGGGAAACATTGTCCAAGGATCAACCTGTCAAAGAAACTGCTACTTCTGTCAACTGA 1680 0.4405 MALLSSGTPWSKVIAPPIFHRSYTTRTSFFRRSFTVSALSESSLPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEAMLKDLSWLGLDYDEGPGVGGEYGPYRQSERNALYKQYAEKLHQSGHVYRCFCSNEELEKMKEDAKLKQLPPVYTGKWASATNEEVEEELSKGTPYTYRFRVPEGSLKINDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALRFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIGEHWKTSGLLTISAGPFIDEAVQLLKDGIDLIPEADEALSKLLSYPLHSTLQSHEAESVLQDNLSEFAGSLLGAYDSGDLVAALEEGQAGWQKWVKGFGKSLKRKGKSLFMPLRLLLTGKLHGPDMGASVVLLYKAGSGGIVAPEAGFVTVDERFKMLRQINWETLSKDQPVKETATSVN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0177 559 Hamap Glutamate--tRNA ligase [gltX]. 45 541 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Apr10g0177 559 PANTHER GLUTAMATE--TRNA LIGASE 39 539 - -
Apr10g0177 559 CDD GluRS_core 46 368 IPR033910 GO:0006424|GO:0008270
Apr10g0177 559 SUPERFAMILY Nucleotidylyl transferase 46 354 - -
Apr10g0177 559 TIGRFAM gltX_bact: glutamate--tRNA ligase 46 514 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Apr10g0177 559 Pfam Anticodon binding domain 394 512 IPR045462 -
Apr10g0177 559 Gene3D - 428 517 IPR020751 -
Apr10g0177 559 PRINTS Glutamyl-tRNA synthetase signature 49 61 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 PRINTS Glutamyl-tRNA synthetase signature 63 74 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 PRINTS Glutamyl-tRNA synthetase signature 78 91 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 PRINTS Glutamyl-tRNA synthetase signature 234 244 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 PRINTS Glutamyl-tRNA synthetase signature 250 258 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 PANTHER GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED 39 539 - -
Apr10g0177 559 Gene3D HUPs 38 370 IPR014729 -
Apr10g0177 559 Pfam tRNA synthetases class I (E and Q), catalytic domain 46 361 IPR020058 GO:0004812|GO:0005524|GO:0043039
Apr10g0177 559 SUPERFAMILY An anticodon-binding domain of class I aminoacyl-tRNA synthetases 355 514 IPR008925 GO:0000049
Apr10g0177 559 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 52 63 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0177 K01885 - gmx:100810730 999.964