Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0175 ATGGGCCAAGTCTTTGACAAGTTTCAGGGTAATGAATGGAGGAAAAGGCAAATAAGGAAGATAACTGATCGAGTTTATGTGAAAGTACAGAATCAAAGGCAATGTGATAACTTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAACAAGTATATTCCTGGTCCCCATTTTGATCCTCCATCAAAAGAGAAAGTTAGAGAACTCATGAAGAACTGTGACATCAACTTGGATGGGGAAATCGATCATGACGAGTTTTTTGATTTCATCCTACAAATGACAGCTGATACATTCACTGTGGTTAGTCAAAAACTTATTGTCACTTTGATTGTTGCACCAACAGTTGCAGTGGCAACAAAGAAAGCCACTGAAGGTGTCCCAGGTGTTGGGAAAGTGGTGCGAAGGTTACCCAATTCGGTTTTTGCTTCCCTTGTGACAATCGCAGCCGTGTGGTTCCAGAAAAGGGGGCAGGAATCTGCACTCTAG 501 0.4092 MGQVFDKFQGNEWRKRQIRKITDRVYVKVQNQRQCDNLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKEKVRELMKNCDINLDGEIDHDEFFDFILQMTADTFTVVSQKLIVTLIVAPTVAVATKKATEGVPGVGKVVRRLPNSVFASLVTIAAVWFQKRGQESAL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0175 166 PANTHER S100 CALCIUM-BINDING PROTEIN 4 163 - -
Apr10g0175 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Apr10g0175 166 Gene3D - 1 105 - -
Apr10g0175 166 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 163 - -
Apr10g0175 166 SUPERFAMILY EF-hand 17 104 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0175 1 156 EF-hand Containing Proteins AT1G64850 66.667 2.63e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0175 - - gmx:100526914 270.011