Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0174 ATGGCGCAAGTGAGGAACAAACAGGTGCTTCTGAGGGACTATGTCAGTGGTTTTCCTAAGGAATCCGACATGAACATCGTACAAGGTACCATAACATTGAAGGTTCCAGAAGGTTCCGATGAGGTGCTACTAAAAAATCTCTACTTGTCCTGTGACCCTTACATGCGAATCCTCATGAGCAAGACGGAAGCCATTGACGGATTTCGTACCTATAGCCCCGCCACTGTGAAAGATTTCAGATTAGGGAGACCATTAACAGGTTATGGTGTGTCTAAAGTTCTAGAATCTGGACACCCAGATTATAAGAAAGGTGACTTAGTATGGGGTACAACTAAATGGGAAGAATACAGCTTGGTTCCCTCAACTCTAATACTTTTCAAAATTGAGCACACTGATGTCCCACTTTCGTACTATACTGGAATTCTTGGTATGCCAGGAATGACTGCTTATGCTGGTTTCTTTGATTTAGGCTCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCATCTGGTGCAGTTGGTCAACTTGTTGGTCAATTTGCTAAATTGACTGGTTGTTATGTTGTTGGAAGTGCCGGAAGTAAAGAAAAGGTGGATCTCTTGAAGGATAAGTTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGCCTGACCTCAATACAACTTTGAAAAGGTACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGTGGGAAGACACTTGATGCTGTACTTTTGAATATGAAAGTCCATGGTCGCATACCTTTGTGTGGAATGGTGTCACAGTATAATCTTAATCAACCTGAAGGTGTAACAAATTTGGCAAATCTCATATTTAAGAGGGTTCTTATGCAAGGTTTTCTTGTAACCGAATTTTATCACTTATATGGAAAATTCTTGGAGTTTGTGCTGCCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATAGTTGAAGGTCTTGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTTTAGTGGTCGTAATGTTGGTAAACAAGTGGTTGTTCTTGCTAGTGAATGA 1056 0.4081 MAQVRNKQVLLRDYVSGFPKESDMNIVQGTITLKVPEGSDEVLLKNLYLSCDPYMRILMSKTEAIDGFRTYSPATVKDFRLGRPLTGYGVSKVLESGHPDYKKGDLVWGTTKWEEYSLVPSTLILFKIEHTDVPLSYYTGILGMPGMTAYAGFFDLGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKDKLGFDEAFNYKEEPDLNTTLKRYFPEGIDIYFENVGGKTLDAVLLNMKVHGRIPLCGMVSQYNLNQPEGVTNLANLIFKRVLMQGFLVTEFYHLYGKFLEFVLPHIREGKVVYVEDIVEGLENGPAALVGLFSGRNVGKQVVVLASE* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0174 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 311 IPR036291 -
Apr10g0174 351 SMART PKS_ER_names_mod 29 346 IPR020843 GO:0016491
Apr10g0174 351 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 1 350 - -
Apr10g0174 351 Gene3D - 141 317 - -
Apr10g0174 351 PANTHER PROSTAGLANDIN REDUCTASE 1 350 IPR045010 GO:0016628
Apr10g0174 351 Gene3D - 8 346 - -
Apr10g0174 351 SUPERFAMILY GroES-like 3 178 IPR011032 -
Apr10g0174 351 Pfam Zinc-binding dehydrogenase 173 305 IPR013149 -
Apr10g0174 351 Pfam N-terminal domain of oxidoreductase 7 120 IPR041694 -
Apr10g0174 351 CDD double_bond_reductase_like 4 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0174 Apr-Chr10 4186269 4199655 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0174 K19825 - gmx:100811802 601.668