Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0172 ATGGCGCAAACGAGGAACAAGCAAGTGGTTCTGAAGGACTACGTGAGTGGTTTTCCTAAGGAATCCGACATGAACCCTTTAACAGGATATGGTGTATCCAAAGTCATAGAATCTGGACACCCAGATTACAAGAAAGGAGACTTAGTATGGGGGTTTACTAAATGGGAAGAATATAGCTTAGTCCCCTCAGCTCTAATCCTTTTCAAAATTGAGCACACGGATGTTCCTCTTTCATACTATACTGGAATTCTTGGTATGGCAGGAATGACTGCTTATGCTGGTTTTTTTGAAGTAGGCTCTCCCAAGAAAGGAGAGAAAGTTTTTGTTTCCGCAGCATCTGGTGCAGTTGGCCAACTTGTTGGCCAATTTGCTAAATTGAGTGATTGCTATGTTGTTGGAAGTGCTGGAAGTAAAGAGAAGGTGGACCTCTTGAAGAACAAATTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGCCTGATCTCAATACAACTTTGCAAAGGTACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGTGGGAAGACACTTGATGCTGTACTCTTGAATATGAAACTCCATGGTCGCATACCCGTATGTGGAATGGTGTCACAGTACAATCTTACTCAACCTGAAGGTGTAACAAATTTGGCAAATCTCATATTTAAGAGGGTTCTTATGCAAGGTTTTCTTGTAAACGAATTTTATCACTTATATGGAAAATTCTTGGAGTTTGTGCTGCCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATAGTTGAAGGTCTTGAGAATGGCCCCGCAGCCTTGGTTGGCCTCTTTAGTGGTCGTAATGTTGGTAAACAAGTGGTTGTTCTTGCTCGTGAATGA 882 0.4093 MAQTRNKQVVLKDYVSGFPKESDMNPLTGYGVSKVIESGHPDYKKGDLVWGFTKWEEYSLVPSALILFKIEHTDVPLSYYTGILGMAGMTAYAGFFEVGSPKKGEKVFVSAASGAVGQLVGQFAKLSDCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEEPDLNTTLQRYFPEGIDIYFENVGGKTLDAVLLNMKLHGRIPVCGMVSQYNLTQPEGVTNLANLIFKRVLMQGFLVNEFYHLYGKFLEFVLPHIREGKVVYVEDIVEGLENGPAALVGLFSGRNVGKQVVVLARE* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0172 293 Gene3D - 14 288 - -
Apr10g0172 293 SMART PKS_ER_names_mod 4 288 IPR020843 GO:0016491
Apr10g0172 293 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 25 - -
Apr10g0172 293 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 26 292 - -
Apr10g0172 293 PANTHER PROSTAGLANDIN REDUCTASE 26 292 IPR045010 GO:0016628
Apr10g0172 293 PANTHER PROSTAGLANDIN REDUCTASE 1 25 IPR045010 GO:0016628
Apr10g0172 293 SUPERFAMILY GroES-like 4 120 IPR011032 -
Apr10g0172 293 Pfam Zinc-binding dehydrogenase 115 247 IPR013149 -
Apr10g0172 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 253 IPR036291 -
Apr10g0172 293 Gene3D - 83 259 - -
Apr10g0172 293 Pfam N-terminal domain of oxidoreductase 25 62 IPR041694 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0172 Apr-Chr10 4153551 4159045 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0172 K19825 - gmx:100811802 511.531