Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0162 ATGGCAATGCCCTGTTCCCGTTTCTTGCGACTGTCACCATTTCTCGCCATTCCATTACCCTCGCCTTCCCTCTCTTTCTCTTCCAACTGCCACGTGTCATCTTCTCCTCAACTCACAGTACACGACGACCACCAACAACCCCATCTCCGTAGCTCACAGCTGGTGACATTAGAATATGCCGACCTCAATCTCTCTTACAACTTGGATCTGGGTCACGTCAGGATCAGGCAACATGTTAATCCCCTCAGCTCTTCTTTCTCCGTTCCTGCACAAGTACCAGAGTGGAACCAAGTCTTTGCAGACCCGACATTGCCACTCATGGTGGATATCGGATGTGGCAGTGGCAGGTTCCTTATGTGGCTCGCTAAAAGAAGTCACAAAGAGAGAAATTTTTTGGGATTGGAAATACGGCAAAGGATAGTCAAGCGTGCTGAGTTATGGGTAAAAGATCTAGCTCTTGATAACATACATTTCTTGTTTGCAAATGCCACAATTTCTTTCAAGCAGTTGGTAGAATCGTATCCCGGGCCCTTGGTCTTAGTTTCAATTTTGTGTCCAGATCCACATTTCAAAAAAAGACATCATAAAAGAAGAGTTCTGCAGAAGCCTTTGGTTGGTGCCATAGTAGATAATCTAATGCCCGGTGGACAGGTGTTTGTACAGTCTGATGTGCTTGACGTGGCACTTGACATGAGAAATCAGTTTGATGAAGTTGACTCACTCAAACACACTGATGCTTTGAACCTGGATATGTTGTGTGACAATGAGGGATGGTTGTTAAGCAACCCCATGGGGATAAGGACTGAGAGAGAGATTCATGCAGAACTTGAAGGGGCAAAAATCTATCGAAGGTTGTACCAGAAGCAGAAATGA 873 0.4536 MAMPCSRFLRLSPFLAIPLPSPSLSFSSNCHVSSSPQLTVHDDHQQPHLRSSQLVTLEYADLNLSYNLDLGHVRIRQHVNPLSSSFSVPAQVPEWNQVFADPTLPLMVDIGCGSGRFLMWLAKRSHKERNFLGLEIRQRIVKRAELWVKDLALDNIHFLFANATISFKQLVESYPGPLVLVSILCPDPHFKKRHHKRRVLQKPLVGAIVDNLMPGGQVFVQSDVLDVALDMRNQFDEVDSLKHTDALNLDMLCDNEGWLLSNPMGIRTEREIHAELEGAKIYRRLYQKQK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0162 290 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 41 289 IPR003358 GO:0006400|GO:0008176
Apr10g0162 290 Gene3D Vaccinia Virus protein VP39 75 290 IPR029063 -
Apr10g0162 290 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 63 288 IPR003358 GO:0006400|GO:0008176
Apr10g0162 290 TIGRFAM TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 91 285 IPR003358 GO:0006400|GO:0008176
Apr10g0162 290 Pfam Putative methyltransferase 105 282 IPR003358 GO:0006400|GO:0008176
Apr10g0162 290 CDD AdoMet_MTases 108 221 - -
Apr10g0162 290 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 41 289 - -
Apr10g0162 290 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0162 Apr-Chr10 4040096 4044722 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0162 K03439 - gmx:100789050 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0162 10 4040096 4044722 Apr10g0162 10 4040096 4044722 ECH