Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0156 ATGGCTTCAAGGCCTGGAATCCTCACTGAGTGGCCATGGAAGCCTCTTGGAAGCTTTAAGTATGTGCTACTAGCTCCTTGGATCATTCATAGTTCATATTCTGTGTTGGTTAAAGATAAGAGTGAAAGGGACATATCCACCTTTCTTATATTCCCATTTTTGCTGTGGCGTATGCTTCATAATCAGATATGGATCACTCTTTCTCGTCACCGAACAGCCAAAGGCAACACTAGAATTGTCGACAAGGGAATTGAATTTGATCAAGTTGATAGAGAAAGAAATTGGGATGACCAAATATTGTTCAATGGATTACTATATTACTTGGCAGCCTATACATTAGATGGGGCATCACGTCTTCCATTGTGGAGAACAAACGGAGTGGTAATGACAATCCTGCTTCATGCTGGACCAGTGGAGTTTCTTTATTACTGGTTACATAGAGCACTTCATCATCACTTTCTCTACTCTCGTTATCATTCTCATCACCACTCCTCCATTGTCACAGAACCCATAAGTTCTGTCATCCATCCATTTGCAGAACACATATCATATTTCCTTCTCTTTGCAATACCCAAGTTAACCCTAGTCTTCACAAAAACAGCCTCTTTGGTGGCCATGATGGCATACGTCACTTACATTGATTTTATGAACAACATGGGCCACTCCAACTTTGAGATCGTTCCAAAGTGGCTCTTTCACAGCTTTCCCCCTCTCAAATATCTCATGTACACACCATCGTTTCACTCTTTGCACCATACCCAGTTCAGGACAAACTACTCCCTATTTATGCCATTTTATGACTACATTTATGGCACCATGGATAAGGCTTCAGATCAATTACACGAGTCAGCACTGAAACGAGGGGAAGAGACCCCAGATGTGGTACACCTAACGCATCTCACTACCCCTGAATCCATCTATTATCTCAGGATTGGATTTGCATACTTAGCCTCTAAACCTTATACGTCAAAGTGGTACCTTTGGTTGATGTGGCCCGTGACAGCTTGGTCCATGATCCTCACATGGCTCTATGGTCGTACATTCATTTCGGAGGGGAACCGTTTTGACAAACTCAAGCTACAAACATGGGCAATACCTAAGTTCAACCTCCAATACCTTTTGCAATCACAAAAGGTGGCCATCAACAGAATGATAGAGGAAGCAATACTAGATGCAGACAGAAAAGGCATAAAGGTTGTGAGCCTAGGCCTTATGAATCAAGGAGAGGACCTTAACATATATGGAGGCCTATATGTTAATAGGCACCCAAAGCTGAAAGTTAAGGTTGTAGATGGTAGCAGCCTTGCAGTTGCTGTTGTTATTAATAGCATTCCCAAAGGAACAACTCAAGTATTACTTAGGGGCAAACTCACCAAGGTTGCTTATGCTATTGCCTTCACATTGCATCAACAGGGCATTCAGGTTGCTACTATGCGCGAGGATGATTATATGAGGCTTAAAAAATCGTTCACTACCTCTGAAACCGATTTGATCATTACCAAAAATTGCACTCAAACGATTTGGTTAGTGGGAGATGGATTGACTGAAGATGAACAACTAAAGGCACCTAAAGGAACATTATTTATTCCATACTCACAATTCCCTCCAAGGAAATATCGCACGGATTGCTACTACCATTACACCCCAGCAATGTTAGCTCCCCATTCTATTGAAAATGTCCACTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGGATAGTGCATTCTTTAGAAGGATGGAATGAACATGAGTGTGGATACACAATGCATAAAATAGACAAAGTTTGGCGTTCAACTCTTCAGCATGGGTTCCAACCTCTTTCTGTCGCAGCAAAAGAGTTAGAGGAACACCAAATTTGTGGTGCTGCTTTTGTTGCCGTCGTTGATAATGACGACATTGACGTCCAGGGCGAATTAGCATTAGACACAACAACATCTGAGGTGTTTCAACCACATCTGAGGATGGAAGAAAGTGGAAGAGTAGTACTAGTGGCAGTGGAAGTAGCAAAGGTTGTTGTCTTTGGGAAGACAAGTGTTGATGTAGCAATCACTTTGGAAGAAGAAAACAACAGCAACAGCAACAGCAACAGGGAAAACGACACTGCCAATTTGATGTCCCTCTACAACAGTGGCAAGAGGATTGGTGTAGGGGGATCTCGCTCGTCTCGCTTGAGCGATACCTGTCTTGCTCAAGCAAGATTGCTTGGCCCAACTATCTTCTCGCACAAAGGTACAGTTAAGACCCCAGCGACCCTTACTTATCTTTTCACCTATCACGACCACGACTATCTCGGAAGACTGTCCAGATGGACCTTTAAGCACATCACTGAAACTGATGTTAGAGCCGATTCAGATGATGGTTATCTAGGTTCAGATGATGACATAGATTTAAAGGAACTGGCTGAGATAGAGAGTTGGCACAGGGTTAATGAATAG 2457 0.429 MASRPGILTEWPWKPLGSFKYVLLAPWIIHSSYSVLVKDKSERDISTFLIFPFLLWRMLHNQIWITLSRHRTAKGNTRIVDKGIEFDQVDRERNWDDQILFNGLLYYLAAYTLDGASRLPLWRTNGVVMTILLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPISSVIHPFAEHISYFLLFAIPKLTLVFTKTASLVAMMAYVTYIDFMNNMGHSNFEIVPKWLFHSFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDKASDQLHESALKRGEETPDVVHLTHLTTPESIYYLRIGFAYLASKPYTSKWYLWLMWPVTAWSMILTWLYGRTFISEGNRFDKLKLQTWAIPKFNLQYLLQSQKVAINRMIEEAILDADRKGIKVVSLGLMNQGEDLNIYGGLYVNRHPKLKVKVVDGSSLAVAVVINSIPKGTTQVLLRGKLTKVAYAIAFTLHQQGIQVATMREDDYMRLKKSFTTSETDLIITKNCTQTIWLVGDGLTEDEQLKAPKGTLFIPYSQFPPRKYRTDCYYHYTPAMLAPHSIENVHSCEDWLPRRVMSAWRIAGIVHSLEGWNEHECGYTMHKIDKVWRSTLQHGFQPLSVAAKELEEHQICGAAFVAVVDNDDIDVQGELALDTTTSEVFQPHLRMEESGRVVLVAVEVAKVVVFGKTSVDVAITLEEENNSNSNSNRENDTANLMSLYNSGKRIGVGGSRSSRLSDTCLAQARLLGPTIFSHKGTVKTPATLTYLFTYHDHDYLGRLSRWTFKHITETDVRADSDDGYLGSDDDIDLKELAEIESWHRVNE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0156 818 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 617 - -
Apr10g0156 818 PANTHER STEROL DESATURASE 1 617 - -
Apr10g0156 818 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Apr10g0156 818 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0156 Apr-Chr10 3902359 3927233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0156 1 614 Lipid Metabolism Gene Families AT1G02190 58.106 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0156 K15404 - aprc:113850618 1629.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0156 10 3902359 3927233 Apr10g0156 10 3902359 3927233 ECH