Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0152 ATGACGAGCATGGAGAGCTTGATCGGGTTGGTGAACCGAATCCAGCAAGCTTGCACCGTTCTCGGAGACTATGGCGGCGCCGACAACGATACCTTCTCTTCTCTTTGGGAAGCTCTTCCTTCCGTCGCCGTCGTCGGTGGCCAGAGTTCGGGTAAGTCTTCGGTTTTAGAAAGCATCGTTGGACGTGACTTTCTTCCTAGAGGATCAGGGATTGTGACAAGGCGTCCGCTGGTGTTGCAGCTTCATAAGGTTGAAGGCAAAGCAAAGGAGTATGCTGAGTTTCTTCACATGCCAGGAAGAAAGATAACTGATTATGCCCTAGTGCGCCAGGAGATTCAGGATGAAACTGATAGAGTAACGGGAAGGACAAAACAAATATCTCCTGTTCCAATTCATCTTAGCATTTATTCTCCACATGTTGTCAACCTAACCTTGATTGATTTACCTGGATTGACTAAGGTTGCTATAGAGGGACAGCCAGAGACTATTGTTCACGACATTGAAAATATGGTTCGATCGTATGTTGAGAAGCCTAATTGTATTATACTGGCAATATCTCCGGCCAACCAAGACATAGCAACTTCTGATGCTATTAAACTTGCAAGGGAGGTGGATCCCTCAGGTGAGAGGACATTTGGGGTGTTGACAAAGCTGGATTTGATGGACAAAGGAACTAATGCCTTGGATGTCCTTGAAGGAAGATCCTATCGTCTGCAACAACCTTGGGTTGGTATAGTAAATCGATCCCAAGCAGATATCAATAAAAATGTTGATATGATATTTGCTAGACGCAAAGAGCATGAATATTTCGCAACCAGTCCTGACTATGGGCACTTAGCCAATAAAATGGGTTCTGAATACCTTGCCAAACTTCTCTCACAGCACTTGGAGTCAGTAATTAGGGCACGGATACCTACTATAACATCTTTGATAAACAAAACCATTGAAGAACTTGATTCAGAGATGGATCATATTGGGAGACCAGTTGCTGTTGATGCTGGGGCTCAACTATACACCATCCTAGAACTTTGCCGTGCATTTGATCGGATATTCAAGGAGCATTTAGACGGAGGGCGACCAGGAGGAGATAGGATATATAATGTTTTTGACAATCAGCTTCCTGCTGCTTTACGGAAGCTTCCATTTGACCGTCATCTTTCCCTTCAGAATGTAAAGAAAGTAGTGTCGGAAGCAGATGGTTATCAGCCTCACTTAATTGCTCCAGAGCAAGGTTACCGGCGTCTCATTGAGGGGGCTCTCAGTTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCAGTTCACTTTGTCTTAAAAGAGCTTGTGAGGAAATCAATAGCTGAAACACAGGAACTGAGACGTTTCCCAACTCTTCAAGCCGAAATAGCTGCTGCTACAAATGAGGCTTTAGAGAGGTTCCGCGAAGAGAGTAAGAAGACAGCTATTCGACTTGTGGATATGGAAGCTTCGTATCTCACTGTGGAGTTCTTTCGGAGACTTCCTCAAGAAGTGGAGAAAGCCGGAAATCCAGCTAAGGCAAATGTAGATAGATATGGAGAAGGACATTATAGGAGGATTGGATCAAATGTGTCATCCTACATAGGTATGGTATCAGACACACTCAGAAACACGATTCCCAAGGCTGTGGTTTATTGTCAGGTCAGAGAAGCAAAACAGTCATTGCTGAACCATTTCTACACACAAATAGGGAAGAAAGAGCCTAAACAGCTATCACAGTTGTTAGATGAAGACCCTGCCTTGATGGAGAGGAGGCAACAATGTGCTAAAAGGCTTGAACTATATAAAGCAGCGAGGGATGAAATTGAATCTGTTTCTTGGACACGATGA 1848 0.4426 MTSMESLIGLVNRIQQACTVLGDYGGADNDTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKVEGKAKEYAEFLHMPGRKITDYALVRQEIQDETDRVTGRTKQISPVPIHLSIYSPHVVNLTLIDLPGLTKVAIEGQPETIVHDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQQPWVGIVNRSQADINKNVDMIFARRKEHEYFATSPDYGHLANKMGSEYLAKLLSQHLESVIRARIPTITSLINKTIEELDSEMDHIGRPVAVDAGAQLYTILELCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSLQNVKKVVSEADGYQPHLIAPEQGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKSIAETQELRRFPTLQAEIAAATNEALERFREESKKTAIRLVDMEASYLTVEFFRRLPQEVEKAGNPAKANVDRYGEGHYRRIGSNVSSYIGMVSDTLRNTIPKAVVYCQVREAKQSLLNHFYTQIGKKEPKQLSQLLDEDPALMERRQQCAKRLELYKAARDEIESVSWTR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0152 615 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 65 74 IPR019762 -
Apr10g0152 615 Pfam Dynamin family 42 217 IPR045063 -
Apr10g0152 615 PANTHER DYNAMIN 3 614 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 39 57 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 64 81 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 137 154 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 187 205 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 206 222 IPR022812 -
Apr10g0152 615 PRINTS Dynamin signature 229 248 IPR022812 -
Apr10g0152 615 ProSiteProfiles GED domain profile. 523 615 IPR020850 -
Apr10g0152 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 314 IPR027417 -
Apr10g0152 615 Pfam Dynamin central region 226 493 IPR000375 -
Apr10g0152 615 Gene3D Dynamin, middle domain 331 582 - -
Apr10g0152 615 SMART dynamin_3 4 256 IPR001401 GO:0003924|GO:0005525
Apr10g0152 615 Gene3D - 4 314 IPR027417 -
Apr10g0152 615 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 36 305 IPR030381 GO:0005525
Apr10g0152 615 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Apr10g0152 615 CDD DLP_1 39 305 IPR001401 GO:0003924|GO:0005525
Apr10g0152 615 Pfam Dynamin GTPase effector domain 520 611 IPR003130 GO:0003924|GO:0005525
Apr10g0152 615 PANTHER DYNAMIN 1E-LIKE PROTEIN 3 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0152 Apr-Chr10 3835784 3841100 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0152 - - gmx:100790977 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0152 10 3835784 3841100 Apr10g0152 10 3835784 3841100 ECH