Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0082 ATGGAGAAGTCAAGGCACATAGCGATTGTAGCCAGTCCATGGTTCAGCATTCAAGCTTCAATCATCGAGTTTTCGAAACGCCTCATCCAACGCTCCACTGACTTGCACGTTACGTGCCTCATTCCCACACTCGGTTCTCTCTCTGATGCCACCAAAGCCATCCTTCAAACACTCCCTTCAAGAGCAACCTTCACTTTGCTTCCCCCAATCCTCTACGGTGACCCACCGCAAGGGACTCCAAAACCACCTCTGTTGTTCGGGCACACAGTGACTCGCTCTCTGCCATATATCCGCGATGCTTTACAATCAATAAGTTCAAGTTCAAGCTCAAGGCTAGTTGCTATGGTTGTCGATTTTTTTGCAAGTGATGCACTGATTTGTGCCAAGGAGCTAAACATGTTGTCCTTCGTTTACTTCCCATCATCGGCTATGACACTGTCTTTCTTCTTACATTTTCCAAAGCTGGATCAGACTGAGATCAGAGACCTATCAGAACCCATTGAAATTCCTGGTTGCGTACCCATTCTTAGCAGAGATCTACCAAAATCAATTCAAGATCGAACTAGTCAAATGTATGCATTCTTTCTTCAACGATGCCAAAAACTACATGTAGTTGATGGGATCATGGTTAACAGCTTTAAAGACATTGAAGAAGGACCTATAAGAGCGTTGAAAGAGGAAGGAAGTGGCTATCCCAGTGTTTATCCGGTTGGACCAATTCTCCAAAGTGTATCAGGTAATGACACAACAAATGGGTGTGAATGTTTAAGGTGGTTGGAGAATCAGGTACCCAATTCAGTTTTGTATGTTAGCTTTGGAAGTGGAGGGACACTTTCACAAGACCAGCTTAATGAGTTAGCTTTGGGATTGGAAATAAGTGGTCAGAAATTCTTATGGGCTGTGAGGGCACCGAGTGAATCTGCCAATTCTGCTCATCTTAATTTTGAAAATGGTGACCCTTTAAGGTTCTTACCAAATGGGTTCATTGACAGGACCAAAGGACAAGGTTTGGTGGTTTCTTCATGGGCACCTCAAGTTCAAGTCCTTAGTCATAATGCAATTGGTGGGTTTTTAAGTCATTGTGGATGGAACTCTACCCTTGAGAGTATCATGAATGGTGTACCTCTTATAGCATGGCCACTGTTTGCTGAGCAGGGAATGAATGCAGTTTTGTTAACTGATGGCTTAGAAGTGGCACTAAGACCTAAAGCTGATGAAAATGGTTTGGTGGAAAGAGGGGAGGTTGCTATGGTTGTGAGAAGATTAATAGAGGGTGAAGAAGGAAGAGAAATTGGTAGAAGAATGCAGAAATTGAAGGATGCTGCTGTTGAAACTCTCCAAGAAGAAGGGTCATCTACGAAGACTCTGATTCAGTTAGCAGTCTATTTGATGAGCAATTAG 1401 0.4333 MEKSRHIAIVASPWFSIQASIIEFSKRLIQRSTDLHVTCLIPTLGSLSDATKAILQTLPSRATFTLLPPILYGDPPQGTPKPPLLFGHTVTRSLPYIRDALQSISSSSSSRLVAMVVDFFASDALICAKELNMLSFVYFPSSAMTLSFFLHFPKLDQTEIRDLSEPIEIPGCVPILSRDLPKSIQDRTSQMYAFFLQRCQKLHVVDGIMVNSFKDIEEGPIRALKEEGSGYPSVYPVGPILQSVSGNDTTNGCECLRWLENQVPNSVLYVSFGSGGTLSQDQLNELALGLEISGQKFLWAVRAPSESANSAHLNFENGDPLRFLPNGFIDRTKGQGLVVSSWAPQVQVLSHNAIGGFLSHCGWNSTLESIMNGVPLIAWPLFAEQGMNAVLLTDGLEVALRPKADENGLVERGEVAMVVRRLIEGEEGREIGRRMQKLKDAAVETLQEEGSSTKTLIQLAVYLMSN* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0082 466 CDD GT1_Gtf-like 6 463 IPR002213 GO:0008194
Apr10g0082 466 Gene3D Glycogen Phosphorylase B; 6 453 - -
Apr10g0082 466 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Apr10g0082 466 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 392 IPR002213 GO:0008194
Apr10g0082 466 Gene3D Glycogen Phosphorylase B; 249 447 - -
Apr10g0082 466 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Apr10g0082 466 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Apr10g0082 466 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0082 Apr-Chr10 1861623 1863900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0082 6 461 Glycosyltransferase AT1G01420 46.537 6.36e-138 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0082 K08237 - gmx:100775732 610.142