Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0034 ATGGCAGACAACAAAAATTCTGATTCCTCAAGTCCTGAGGACAACATGCTACCACCTCTCCTTACTATCTTTTCTGACCCTAATCAAAATTCATCTAGTCCCTTTTATATCCACCCTAGTGAGAGTCCATCCTCTGTTATTGTTACTCCATCTCTATCAAGCAGCAATTATCTGTATTGGTCACGATTAGGGATGACAATGGGTAGGGAATATTACTACAAGAAGAGTCATGTGCCAGCATTTGGGAGCTGGGATTGGAATGAGAACCTTCCTTTCACACAGTGCTTCGAGACGGCGAGGCAAGCTGGTTTGCTACGATGCAGTTGCTCTGAGTCTGAGGACCGTGACCTTTACGTTACAGGGGACTTGTATGAGAATGATGTTGTCACACCCGCCATGATCGTTGTTCCTCGCAGAAAGGCAAAGGTGCGTGAGCAGCATGAAAAAGAAACAAAAATGATGAAGAATTGGGTGAGTGACGTGGAAATCGAACCACCGAGCCCAAATCCACTGCCAAGGCCAACTCCAAAACCTGTTGATGAGGACTTGTACAAGATCTCACCGGGGCTTCTTTATGCTAAGGCTAAAAAGAAGAGAGGGTTGTGTTTCTTTTCTAGTTGCTTGTTACCAACTTGCATTGCCTGA 645 0.4512 MADNKNSDSSSPEDNMLPPLLTIFSDPNQNSSSPFYIHPSESPSSVIVTPSLSSSNYLYWSRLGMTMGREYYYKKSHVPAFGSWDWNENLPFTQCFETARQAGLLRCSCSESEDRDLYVTGDLYENDVVTPAMIVVPRRKAKVREQHEKETKMMKNWVSDVEIEPPSPNPLPRPTPKPVDEDLYKISPGLLYAKAKKKRGLCFFSSCLLPTCIA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0034 214 PANTHER EXPRESSED PROTEIN 71 213 - -
Apr10g0034 214 Pfam gag-polypeptide of LTR copia-type 38 63 IPR029472 -
Apr10g0034 214 MobiDBLite consensus disorder prediction 1 23 - -
Apr10g0034 214 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 71 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0034 Apr-Chr10 750271 767483 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0034 - - aprc:113849455 429.483