Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0026 ATGGCGTCACCATCGCCTTCCCCATCAATGCCCACATTCCTCCTTCTCCTCGCTCTCTTCGCCACCACAGCCTCGTCTCTTACCTGCACAACCCAAAAGGTAACGGACAACACAAACAGGCTCTACTCAAACTGCGTGGACCTCCCCGTACTCAATTCCTTCCTCCACTGGACTCATGATGCCGCTAACGCCACCCTCTCGGTGGCGTTCGTGGCGGCGCCGCCGAGTCCGGGAGGATGGGTGTCGTGGGGAATCAATCCAACGGGTTCGGGCATGGTGGGGGCGCAGGTGCTGGTGGCGTTTAAGAGCGACGGTGCAATGACAGTGAAAACGTTTGACCTTAAGTCTTACAGTGCCATTGTTCCTGGGAAGCTGTCGTTTGAGGTGTGGGATATGAGGGGTGAAGAGGTGGGTGGGGTGATGAGGATTTTCGCCACCGTTAAGGTGGCAGAGAAGGTTGAGAGTTTGAACCATGTGTGGCAAGTGGGACCCTCTGTCACCGCTGGGAGATTGGATAAGCATGATTTTGGTGCTGCCAATTTGAATTCCAAGGGGACGCTTAACTTGAATAGCGGTGGTGGACAGAGCTCTGGTGGGGGTGCCGTCGACTCAATCACCAAGAAGAAAAATATTCATGGAGTTCTAAATGCCGTGAGTTGGGGTGTGCTTTTCCCCCTTGGAGTGATCATAGCAAGGTACCTGAGGGTTTTTCCGTCTGCAGATCCTGCTTGGTTCTATCTTCATGTTGGGTGCCAGCTATCTGCTTATGCCATTGGGGTTGCTGGTTGGGGAACTGGTATGAAACTTGGAAGCGAATCAGAGGGGATTGAATTCAGTGGTCATCGCAACATTGGCATTACCCTCTTTTGTTTTGCCACTCTACAGATATTTGCTTTGTTCATCAGGCCAAAGAAGGATCACAAATATCGGTATTTATGGAATATCTATCATCACAGCGTTGGATACTCCATAATTATCCTGGGAATTATCAACATATTCAGGGGCTTTGACATCTTGCATCCTGATAAGAAATGGAAATCAACTTACATTGCGGTGATTATTGCACTGGCTGCAGTTGCTTTGTTTTTGGAAGTGGTCACATGGATTGTTGTCTTGAAGAGAAAGTCTAACAAGTCCACCAAACCTTATGATGGATACAACAGTGGACAAAACAGGCAACAGCCCCTTAATATGTAA 1197 0.4921 MASPSPSPSMPTFLLLLALFATTASSLTCTTQKVTDNTNRLYSNCVDLPVLNSFLHWTHDAANATLSVAFVAAPPSPGGWVSWGINPTGSGMVGAQVLVAFKSDGAMTVKTFDLKSYSAIVPGKLSFEVWDMRGEEVGGVMRIFATVKVAEKVESLNHVWQVGPSVTAGRLDKHDFGAANLNSKGTLNLNSGGGQSSGGGAVDSITKKKNIHGVLNAVSWGVLFPLGVIIARYLRVFPSADPAWFYLHVGCQLSAYAIGVAGWGTGMKLGSESEGIEFSGHRNIGITLFCFATLQIFALFIRPKKDHKYRYLWNIYHHSVGYSIIILGIINIFRGFDILHPDKKWKSTYIAVIIALAAVALFLEVVTWIVVLKRKSNKSTKPYDGYNSGQNRQQPLNM* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0026 398 PIRSF UCP037471 7 397 IPR017214 -
Apr10g0026 398 MobiDBLite consensus disorder prediction 379 398 - -
Apr10g0026 398 ProSiteProfiles Cytochrome b561 domain profile. 170 372 IPR006593 -
Apr10g0026 398 CDD DOMON_CIL1_like 42 190 IPR045265 -
Apr10g0026 398 Pfam Protein of unknown function (DUF568) 92 189 IPR045265 -
Apr10g0026 398 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 382 - -
Apr10g0026 398 Gene3D - 188 381 - -
Apr10g0026 398 ProSiteProfiles DOMON domain profile. 51 163 IPR005018 -
Apr10g0026 398 Pfam Eukaryotic cytochrome b561 212 336 IPR006593 -
Apr10g0026 398 SMART 561_7 211 336 IPR006593 -
Apr10g0026 398 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 13 382 - -
Apr10g0026 398 CDD Cyt_b561_FRRS1_like 183 349 - -
Apr10g0026 398 MobiDBLite consensus disorder prediction 381 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0026 Apr-Chr10 556994 559514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0026 - - gmx:100776506 621.313