Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0013 ATGTCCCTCAACCGCATCCTCACCGCGGCTCGCCGCTCCGAACGGCGGTCCTCCGCCCTAAACTCCATCCGCTCCCTCTCTGCCGCCCCCGCAGTGGCCCCCTCAGCCGCCTCCCCACCCTCCCCTCCGCCACCCACCGCCATGATCTACGATCGCGTTGCCGAAGCCGTCAAGTCCAAACTCCACCAACTCGAAAACCCCGATCCCCGCTTCCTGAAACACGGTTCCCCCCGCCCCACCCTCTCCGACCACACGCGCATCCTCTCCGCCCCCGAAACGCGCGTCACCACTCTCCCCAACGGCCTCCGCGTCGCCACCGAGTCTACCCTCTCCGCCCACACCGCCACCGTCGGCGTCTGGATCGACGCGGGGTCCAGGTTCGAGACTGAGGAGACCAATGGAACTGCGCATTTTTTGGAACACATGATCTTCAAGGGCACCGAGAGACGCAACGCTCGTGAACTTGAGGAGGAGATCGAGAACATGGGAGGACACCTTAACGCCTACACCTCCAGAGAACAGACCACATATTATGCTAAGGTTACAGACAAGGATGTTCCACACGCGCTGGATATTCTCGCCGACATTCTCCAGAACTCGCGATTCGATGATAACCGCATCAGCCGCGAGCGTGACGTCATTCTCAGGGAAATGGAGGAGGTTGAGGGTCAGACAGAGGAAGTGATCTTTGACCATCTGCATGCAACGGCGTTTCAGTACACTCCTCTTGGTAGAACCATTCTTGGACCTGCTCAGAACATTAAGACAATCACCAAAGCTCATCTGCAGAACTACATTCAGACACACTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAAGATATTGTTGAGCAAGTGAAAAAATTGTTTACCAAGTTGTCAACAGATCCCACCACAACTTCTCAATTAGTTGCAAAAGAACCAGCTACTTTTACTGGTTCTGAGGTTAGAATGCTTGATGATGATATTCCCCTTGCACAATTTGCGGTAGCTTTTGAAGGGGCATCTTGGAAGGATCCGGATTCAATTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAGACGGCAGGAGGTGGAAAACACATGGGTTCTGAGTTAGCACAACGAGTTGGCATTAATGAAGTTGCAGAGAGCATGATGGCTTTCAATACCAATTATAAGGACACAGGTCTTTTTGGTGTATATGCTGTTGCTAAGCCTGATTGCTTGGATGATTTGTCCTATGCAATAATGTATGAGACAACCAAGTTGGCTTACCGTGTCTCAGAAGATGATGTTACACGTGCTCGTAATCAGCTGAAATCCTCACTTCTGCTTCACATAGACGGAACAAGCCCAGTAGCAGAAGATATTGGCCGTCAGCTACTCACATATGGTCGAAGAATCCCATTTGCTGAGTTGTTTGCTAGAATTGATGCTGTTGATGCCAGTACCATTAAACGGGTTGCAAACCGATTTATCTATGACAAGGATGTTGCTATTGCTGCCATGGGACCTGTTCAGCGTTTGCCTGATTACAACTGGTTCAGACGCAGAACCTACTGGAACCGCTATTAG 1584 0.5133 MSLNRILTAARRSERRSSALNSIRSLSAAPAVAPSAASPPSPPPPTAMIYDRVAEAVKSKLHQLENPDPRFLKHGSPRPTLSDHTRILSAPETRVTTLPNGLRVATESTLSAHTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPHALDILADILQNSRFDDNRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQNYIQTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTTSQLVAKEPATFTGSEVRMLDDDIPLAQFAVAFEGASWKDPDSIALMVMQAMLGSWNKTAGGGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLSYAIMYETTKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVAIAAMGPVQRLPDYNWFRRRTYWNRY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0013 527 PANTHER METALLOPROTEASE 32 527 - -
Apr10g0013 527 MobiDBLite consensus disorder prediction 1 47 - -
Apr10g0013 527 Gene3D - 80 302 - -
Apr10g0013 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 89 296 IPR011249 GO:0046872
Apr10g0013 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Apr10g0013 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 318 517 IPR011249 GO:0046872
Apr10g0013 527 Gene3D - 309 527 - -
Apr10g0013 527 PANTHER BNAA01G33220D PROTEIN 32 527 - -
Apr10g0013 527 Coils Coil 152 172 - -
Apr10g0013 527 Pfam Insulinase (Peptidase family M16) 103 250 IPR011765 -
Apr10g0013 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
Apr10g0013 527 MobiDBLite consensus disorder prediction 66 80 - -
Apr10g0013 527 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0013 Apr-Chr10 236724 241994 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0013 K17732 - gmx:100777553 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0013 10 236724 241994 Apr10g0013 10 236724 241994 PCT