Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0007 ATGGCTATGCTTCTTATTCCATTGTTAGTTTTTTCTCTGGCATTCAGCACATCGAACGCAGGTTTCTCATCCCAACCAGGAATCTGCTACGGCCAACTCGGCGACAACCTTCCACCGCCAAAAGAATCAGTGGAACTCATAAAGTCCCTCAAAGCAAAGCGCGTGAAGATCTACGACGCAAACCCAGAGATCCTGCACGCACTGAGGAACTCTTCACTCCAAGTCTCAATCATGGTTCCGAACGAACTCATCGCCAACATCTCCTCGAACCAAACACTCTCGGACCAATGGATCCTCACCAACGTAGTACCGTTCTACCCTCACACCCTCATCCGTTACCTCCTAGTAGGCAACGAAATAATCTCCTCCACTACCAACCAAACCTGGCCCCACCTCGTACCCGCCATGCGCCGCATCAAACACTCCCTCAAAGCCTTCGGAATCCGCAAGGTTAAAGTCGGCACCTCCTCCGCAATGGACGTTTTAGAAACCTCTTTCCCTCCCTCCAACGCTGCGTTTCGTAAAGACATAGCGGTTCGGGTCATGAAACCCATGTTAAAGTTTTTAAACCGAACGAAGTCTTCTTTTTTCTTAGACGTTTACCCCTTCTTCGCTTGGTCTTCTGATCCGGTTAATATCAACTTGGATTACGCATTATTTGAGTCCAGGAACATTACCGTTACGGATCCGGGTACGGGTTTGGTTTATACGAACCTTTTTGACCAGATGGTGGATGCGGTTTATTTTGCCATCAAGAGGCTCGGGTTTTCGGGTATTCGGATCTTCATTGCAGAAACGGGTTGGCCCAATGGAGGTGATATTGACCAAATTGGAGCCAATATTTACAACGCTGCCACTTATAATCGTAATTTTGTCAAGAAGGTTATGAGAAAACCCGCGGTGGGGACTCCGGCTCGACCGGGTGCAGTTCTACCGTCGTTTTTGTTCGCTTTGTTTAATGAGAACCAGAAACCGGGTCCGGGTACGGAGCGGCATTTCGGGTTGTTGTACCCGAACGGATCGAGGGTTTATGATATTGATTTGTCTGGGAAGACGCCGGAGTCGGAGTTTCGACCGTTGCCGCCGCCGGAGAATGACACGCCGTTCAAGGGGAAGATATGGTGCGTGGCCGCGCGTCGGGATAACGCGACGGCGTTAGCTGCGGCGTTGTCGTATGCTTGTTCGCAGGGGAATGGCACGTGTGATCCGATTCAACCCGGGAAAGCATGTTTTAAACCCGATTCGCTTTTCTGGCATGCGAGCTATGCATTTAGTTCTTACTGGGCGCAGTTTAGGAAGACGGGGGGAACTTGTTACTTCAATGGGCTTGCAACTCAAACTGCAAAGGATCCAAGTTATGGATCTTGCAAGTTCCCAAGTGTGACACTTTGA 1392 0.4978 MAMLLIPLLVFSLAFSTSNAGFSSQPGICYGQLGDNLPPPKESVELIKSLKAKRVKIYDANPEILHALRNSSLQVSIMVPNELIANISSNQTLSDQWILTNVVPFYPHTLIRYLLVGNEIISSTTNQTWPHLVPAMRRIKHSLKAFGIRKVKVGTSSAMDVLETSFPPSNAAFRKDIAVRVMKPMLKFLNRTKSSFFLDVYPFFAWSSDPVNINLDYALFESRNITVTDPGTGLVYTNLFDQMVDAVYFAIKRLGFSGIRIFIAETGWPNGGDIDQIGANIYNAATYNRNFVKKVMRKPAVGTPARPGAVLPSFLFALFNENQKPGPGTERHFGLLYPNGSRVYDIDLSGKTPESEFRPLPPPENDTPFKGKIWCVAARRDNATALAAALSYACSQGNGTCDPIQPGKACFKPDSLFWHASYAFSSYWAQFRKTGGTCYFNGLATQTAKDPSYGSCKFPSVTL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0007 463 Gene3D Glycosidases 26 355 - -
Apr10g0007 463 SMART X8_cls 373 458 IPR012946 -
Apr10g0007 463 Pfam Glycosyl hydrolases family 17 27 347 IPR000490 GO:0004553|GO:0005975
Apr10g0007 463 SUPERFAMILY (Trans)glycosidases 27 347 IPR017853 -
Apr10g0007 463 Pfam X8 domain 374 445 IPR012946 -
Apr10g0007 463 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 455 IPR044965 GO:0004553|GO:0005975
Apr10g0007 463 PANTHER BNAC03G35190D PROTEIN 9 455 - -
Apr10g0007 463 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Apr10g0007 463 Gene3D - 369 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0007 Apr-Chr10 105308 107699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0007 21 463 Glycoside Hydrolase AT3G23770 57.623 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0007 - - gmx:100815282 773.852