Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0002 ATGGGCTGTTTGGATGATGGGCGATTCGCTGTTGAGCTTGAAAATGGTGTGAACATTGGTTGTGGTGAAGTGGGTTTCGAAGAAGAGGGGAAGAGCGGTGCCATTGAAGATGCTGTAAAGGTTTTGTTGGAGGGTCTAGGAGAAGATGTAAACAGAGAAGGTCTTAGAAAAACGCCACTTCGTGTTGCAAAGGCCCTTCGTGAAGGAACCAAAGGTTACAGACAAAAAGTGAAGGATATTGTTCAAGGTGCTTTATTCCCTGAAGCTGGTCTAGATAATAGAGTTGGTCAAGCAGGTGGAGCAGGCGGACTTGTGATTGTTCGGGATCTTGATATGTTTTCCTATTGTGAATCCTGCTTGCTTCCGTTCCAGGTCAAATGTCATGTGGGCTATGTCCCCTCTGGTGAAAGAGTTGTCGGTTTAAGCAAGCTCTCTCGAGTTGCTGATGTATTTGCAAAACGATTGCAAGAGCCTCAGCGTCTTGCAGATGAGATTTGTTCTGCTTTGCATCAGGGAATAAAACCAGCAGGTGTTGCTATCATACTTCAATGTACACACATCCACTTTCCTGACATAGAATCAGTCTTTCTTGACTCAAATCACCAAGGATCGGTGAAGATACTTATTTCCTCAGGTTCTGGGGTTTTTGAGAATGAAAATGCAGATATATGGTCTGATTTCTTTAGTCTTCTTAAATTTAGAGGCATCAATATGGATAAAATTCATTTTAGAGGATCATCTGACCCATGCTGGTGTCCTTCTCAATCTTCTCTTTCTACCAAAGTTTCCTCCAAAATTGGACCAGTCAATCCTATAATGGTCACTGCAGTAGCTTCAATTATCAAATCTTTGGGAGAAGATCCACTGAGGAAGGAGCTTACGGGGACTCCAAGTAGATTTGTGAAATGGTTGATGAACTTTCAATACAGTAACTTTGATATGAAGCTGAATGGTTTTCTTTGTGGTGGGATAGATTCTTTGAATGTCAATGAGGAGGTTAACATCAGCAACAAAAAGATGTACTCTGAATTAAACATACCCTTTTGGTCACAATGTGAGCATCATTTGCTTCCATTTCATGGTGTCGTTCACATAGGATACCTCATATCCGACGGATTCAATCCTATTGGAAAATCACTTCTACAATCAATAGTACACTTTTATGGTTTCAAGCTCCAAGTTCAGGAAAGGCTTACCAGGCAGATAGCTGAAATCATTTCCCCACTGTTAGGTGGAGATGTGATAGTAGTTGTAGAGGCAAGCCACACATGTATGATTTCCAGGGGAATTGAAAAGTTTGGAAGTAATACAGCTACGATTGCGGTGTTGGGACGTTTTTCAACCGACCTTGCTACAAGGGCTTTGTTCTTGCAGAGCATTCCTAGTCCTACATCTTCTGGAGAGCAATGA 1410 0.4184 MGCLDDGRFAVELENGVNIGCGEVGFEEEGKSGAIEDAVKVLLEGLGEDVNREGLRKTPLRVAKALREGTKGYRQKVKDIVQGALFPEAGLDNRVGQAGGAGGLVIVRDLDMFSYCESCLLPFQVKCHVGYVPSGERVVGLSKLSRVADVFAKRLQEPQRLADEICSALHQGIKPAGVAIILQCTHIHFPDIESVFLDSNHQGSVKILISSGSGVFENENADIWSDFFSLLKFRGINMDKIHFRGSSDPCWCPSQSSLSTKVSSKIGPVNPIMVTAVASIIKSLGEDPLRKELTGTPSRFVKWLMNFQYSNFDMKLNGFLCGGIDSLNVNEEVNISNKKMYSELNIPFWSQCEHHLLPFHGVVHIGYLISDGFNPIGKSLLQSIVHFYGFKLQVQERLTRQIAEIISPLLGGDVIVVVEASHTCMISRGIEKFGSNTATIAVLGRFSTDLATRALFLQSIPSPTSSGEQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0002 469 Gene3D - 330 462 IPR043133 -
Apr10g0002 469 PANTHER GTP CYCLOHYDROLASE I 1 465 IPR001474 GO:0003934|GO:0046654
Apr10g0002 469 Gene3D - 98 234 IPR043133 -
Apr10g0002 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 19 232 - -
Apr10g0002 469 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 270 461 - -
Apr10g0002 469 Gene3D - 269 310 IPR043134 -
Apr10g0002 469 Gene3D - 26 80 IPR043134 -
Apr10g0002 469 PANTHER GTP CYCLOHYDROLASE I 1 1 465 - -
Apr10g0002 469 Pfam GTP cyclohydrolase I 35 187 IPR020602 -
Apr10g0002 469 Pfam GTP cyclohydrolase I 275 460 IPR020602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0002 Apr-Chr10 30299 35371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0002 K01495 - gmx:100783814 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0002 10 30299 35371 Apr10g0002 10 30299 35371 PCT