Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3468 ATGGGAGAGAAAATGATCAAAACCAAACATGTAGCTCACTGTTTGGTCTTGGCCTACCCAGGACAAGGCCACATAAACCCCATGATTCAGTTCTCTAAGCGTTTATCACACAAAGGAATCAAGATCACACTTGTAACCACTCTTTCCTTTTGGAACCAAACCAACAACAATGACAATAATTTCTCTCCGGCTATCGAACTGGAGAGCATCTCAGACGGGTATGACGACGGCGGCCATTTAGCCGCCGCCACCCTAGAGATCTACAAAGACACCTTCTGGAAGGTTGGACGCCAAACTCTATCAAACCTTATTCGCAAACTCGGAAGTAGTAGTTGCAATTACAATAATGTCCCTGTGGATTGTGTTGTTTATGATGCTTTCATGCCTTGGGCGCTTGATGTTGCAAAAGAGTTTGGAATCCTTGGTGCAGCGTTCTTCACTCAGCCATGTGCCGTGAACAACGTATACTTCCATGTTCACAAGAAGTTGATTGAGTTGCCACTTTCGGAATCGGAATATTCGTTGCCGGGGTTGGTTAAGCTTTTGCCACAAGAGTTGCCATCTTTCTTGTATGAGTATGGATCCTATCCTGGCTACTTTGACATCGTTACGGATCAGTTTTCAAACATTCATAAGGCAGATTGGGTGCTTGCAAACACATTTGATGAACTCGAACAAGAGGTTATTGAATGGTTGTCAAAGATTTGGCCACTGAAGACAATAGGACCATGTGTACCATCTATGTACCTAGACAAAAGACTCCAACATGACAAGGACTATGGTATCAGTATCCATAACCAAAACATAGATGCTTGCATTGAATGGCTCAATGACAAGCCCAAAGGTTCAGTTGTGTATGTCTCTTTTGGGAGCATGGCAGGTCTTAGTGAGAAACAAACCGAGGAACTAGCTTATGGTTTGAAAAATAGTAACTATTATTTCATGTGGGTGGTTAGAGCTTCAGAACAAAACAAACTTCCAAAGGGAACATTTTTGGACACATTAGAAAAGGGTTTAATAGTTACATGGTGTCCTCAATTACAAGTGTTAACACATGATGCTGTTGGGTGCTTTATTTCACATTGTGGTTGGAATTCTACATTGGAGGCTTTGAGCTTAGGTGTTCCTATGATTGCAATGCCACTTTGGACTGACCAAACCATAAATGCAAAGTATATTAAGGATGTTTGGAACATGGGGCTCAAGGTTGTGGTTGATGAGGTGGAAGGTGTGGTTAAAAGAGAAACTATTGGGAATTGCATAAAGGAAATTATGGAGAGTGAGAAAGGGAATGGAATTAAGGAAAATGCCATCAAATGGAAGAATCTTGCTAAGGATTCTGTTGATGAGGGGGGAAGTTCTGATAAGAATATTGAAGAGTTTGTGGCAAAGTTGGCTCATTATGCTGCTGCCAAATGA 1419 0.4165 MGEKMIKTKHVAHCLVLAYPGQGHINPMIQFSKRLSHKGIKITLVTTLSFWNQTNNNDNNFSPAIELESISDGYDDGGHLAAATLEIYKDTFWKVGRQTLSNLIRKLGSSSCNYNNVPVDCVVYDAFMPWALDVAKEFGILGAAFFTQPCAVNNVYFHVHKKLIELPLSESEYSLPGLVKLLPQELPSFLYEYGSYPGYFDIVTDQFSNIHKADWVLANTFDELEQEVIEWLSKIWPLKTIGPCVPSMYLDKRLQHDKDYGISIHNQNIDACIEWLNDKPKGSVVYVSFGSMAGLSEKQTEELAYGLKNSNYYFMWVVRASEQNKLPKGTFLDTLEKGLIVTWCPQLQVLTHDAVGCFISHCGWNSTLEALSLGVPMIAMPLWTDQTINAKYIKDVWNMGLKVVVDEVEGVVKRETIGNCIKEIMESEKGNGIKENAIKWKNLAKDSVDEGGSSDKNIEEFVAKLAHYAAAK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3468 472 CDD GT1_Gtf-like 15 465 IPR002213 GO:0008194
Amo20g3468 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 446 IPR002213 GO:0008194
Amo20g3468 472 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Amo20g3468 472 Gene3D Glycogen Phosphorylase B; 17 458 - -
Amo20g3468 472 PANTHER GLYCOSYLTRANSFERASE 12 465 - -
Amo20g3468 472 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 12 465 - -
Amo20g3468 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 466 - -
Amo20g3468 472 Gene3D Glycogen Phosphorylase B; 259 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3468 Amo-Chr20 144331388 144334270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3468 12 465 Glycosyltransferase AT2G43820 48.802 1.17e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3468 K13691 - gmx:100787483 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3468 20 144331388 144334270 Amo20g3468 20 144331388 144334270 ECH