Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3167 ATGATACTACTGCAAAAGAAATCAATCCATCACGGGATCGGAAAAGGTGGAGAAAGAAAGAGAAGAAACAAGGTGAAGCTGCTGAGCATAAAGGTTATCAGTTTTCAGTGGGATATTTCTTCTGTGAAGAAAGATACTACTGTAAAGGAGGTAGATTCATTGCTATGTAAAAATGTTGATCCTAAAAACAAAGGTCCTAATGTTTCGCTGGATAATTGTTCGCCACAGACTGATGCCCCTTCTGAGAAGATAAATTCATCACCGAAGCCGAAAAGGGAAAGAAAGGAGAAGAAACCGGTTGAAGCTGTTGAGCATAAAGATCAAGGTCCTGATGTTTCACTTGGTAAATCTACTCCAAATACTGATATGGATAATGAATTTTCTAATATTGATGCTACTAGAGAGGATGTAAGTTCATCATCGAAGCGGAAAAGGAAGAGAAAGAAGAAGAAACAAGAAAAAGCTGTTGAAGATAAAGGCCCTCGTGCTTCACTGGATAAGAATTCTCAGAAGATTGATGATACCGCAGAGGATTCGTTAAACATATCCCCAGCTTTACCTAATCCTTTAGGCTCCCAAGATATTGTAGAATGTAGTTCTAAGAAGAGAAACAAAAGAAGGAAACGGCAGAAGACAAAATATAATGCTGTTGAAAGCATTGTCAACACTAATGATGTGCCAAAAGATACCTTTTCATCAAAATTTTGTACACCTGCCTTGCATATGCCTTCAGAACATCCAATTCAATTTGGGTCCGCTGATCCTATAAGAGGACAATCTTGTGCGGAGACAAATATTTGTCAGCAAGACAATGACAAAGGGGATCAGCATATACCAATAAAGGAAGCGGAAAACACCAGTGGGGAGTATGTTGTTAAAGACATAAGCCGGTCCTACAACTCAAAGAATAAGCTTCTTATCCTTGACATGAATGGACTTCTAGCTGACTTTGTCAAAAAGGTTCCTCAAGGAAGTAAAAGTCCGGATTTTAAAATTTATGGGGGAAGAAAAGGGTCGATAAAAGTTTTCAAGAGGCCCTTCTGTGATGAGTTTATACAGTTTTGTCTTGACAGGTTTCATGTGGGTGTTTGGTCATCTAGAAAGAAGAAAAATCTTGGTAGAGCAGTCAACCAAATTTTTGGGGAATCAGCATCCAAACTGCTCTTTCAATGGGATCGGTCCCACTGTACGAAAACAGGATCTTGTACCCTTGAGGACAAATTCAAGCCAATTGTGTTCAAGGAACTTCGAAAGTTATGGGAAAAAGTGGATGCCAGTCTTCCATGGAAGAAGGGAGAGTTTAATGAGTCAAACACATTATTGTTGGATGACTCCCCTTACAAAGCATTACTGAATCCTAGGAACACAGCAATATTTCCCAATCCTTACCATATTGATGATGTTGATGACACATCATTAGGGCTGGGAAGTGATCTTCATATGTACCTTGAAGGGCTGGCTGGGGCTGAGAATGTTCAAGAGTATGTGGCATCACATCCATTTGGCCAAGAGGCCATAACCGAAACACACCGGTCTTGGAATTTCTATCGCAAAGTTATTGAAGCAGTTAAACGCAACAAAATTGCTGCTCAGATGCGGGCTATGTCTAGGGGACAATTGCAGAGCTCCACCGTAACAGGCGAAAATACTGTCCATTTGCTTCCTGCTGCCGGTGATCCTCCACAAGAGCCCACAACACTTGTTGCTAGCGCCACCGATGATCCACAGTTGACCAAGGCGCCACCACCTCCCACTACCCGAGATCCACTACAATTGACTGATCCAGTGCCACTTCCTTCCACAGCCACTGCGGCAATGCTTCCTTAA 1827 0.4165 MILLQKKSIHHGIGKGGERKRRNKVKLLSIKVISFQWDISSVKKDTTVKEVDSLLCKNVDPKNKGPNVSLDNCSPQTDAPSEKINSSPKPKRERKEKKPVEAVEHKDQGPDVSLGKSTPNTDMDNEFSNIDATREDVSSSSKRKRKRKKKKQEKAVEDKGPRASLDKNSQKIDDTAEDSLNISPALPNPLGSQDIVECSSKKRNKRRKRQKTKYNAVESIVNTNDVPKDTFSSKFCTPALHMPSEHPIQFGSADPIRGQSCAETNICQQDNDKGDQHIPIKEAENTSGEYVVKDISRSYNSKNKLLILDMNGLLADFVKKVPQGSKSPDFKIYGGRKGSIKVFKRPFCDEFIQFCLDRFHVGVWSSRKKKNLGRAVNQIFGESASKLLFQWDRSHCTKTGSCTLEDKFKPIVFKELRKLWEKVDASLPWKKGEFNESNTLLLDDSPYKALLNPRNTAIFPNPYHIDDVDDTSLGLGSDLHMYLEGLAGAENVQEYVASHPFGQEAITETHRSWNFYRKVIEAVKRNKIAAQMRAMSRGQLQSSTVTGENTVHLLPAAGDPPQEPTTLVASATDDPQLTKAPPPPTTRDPLQLTDPVPLPSTATAAMLP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3167 608 MobiDBLite consensus disorder prediction 113 127 - -
Amo20g3167 608 SMART forpap2 302 470 IPR004274 -
Amo20g3167 608 MobiDBLite consensus disorder prediction 555 608 - -
Amo20g3167 608 MobiDBLite consensus disorder prediction 1 20 - -
Amo20g3167 608 MobiDBLite consensus disorder prediction 58 213 - -
Amo20g3167 608 MobiDBLite consensus disorder prediction 65 84 - -
Amo20g3167 608 Gene3D - 261 502 IPR023214 -
Amo20g3167 608 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 83 527 - -
Amo20g3167 608 SUPERFAMILY HAD-like 296 497 IPR036412 -
Amo20g3167 608 ProSiteProfiles FCP1 homology domain profile. 299 486 IPR004274 -
Amo20g3167 608 MobiDBLite consensus disorder prediction 175 197 - -
Amo20g3167 608 MobiDBLite consensus disorder prediction 85 111 - -
Amo20g3167 608 MobiDBLite consensus disorder prediction 153 174 - -
Amo20g3167 608 Pfam NLI interacting factor-like phosphatase 304 492 IPR004274 -
Amo20g3167 608 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 83 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3167 Amo-Chr20 137031455 137036337 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3167 - - aip:107623105 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3167 20 137031455 137036337 Amo20g3167 20 137031455 137036337 ECH